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2024-08-15Revert "rshiny: add logging for applications"jgart
This reverts commit 57444f7e0f360eb88e11aed4217143cafb164325.
2024-08-15Revert "rshiny: refactor import code into define-module form"jgart
This reverts commit 4addf0abad6c05b060ea4947512c6b413e3b750b.
2024-08-15gn: genenetwork2: Update genenetwork2 with new markdown client deps.Alexander_Kabui
* gn/packages/genenetwork.scm: (genenetwork2) [propagated-inputs]: Add javascript-ace, javascript-diff, javascript-diff2html, javascript-diff2html-ui javascript-highlight, javascript-highlight-ui, javascript-marked, javascript-marked-highlight. Reviewed-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-08-15gn: javascript: Add javascript-highlight-ui.Alexander_Kabui
* gn/packages/javascript.scm (javascript-highight-ui): New package. Reviewed-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-08-15gn: javascript: Add javascript-highlight.Alexander_Kabui
* gn/packages/javascript.scm (javascript-highlight): New package. Reviewed-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-08-15gn: javascript: Add javascript-diff.Alexander_Kabui
* gn/packages/javascript.scm (javascript-diff): New package. Reviewed-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-08-15gn: javascript: Add javascript-diff2html-ui.Alexander_Kabui
* gn/packages/javascript.scm (javascript-diff2html-ui): New package. Reviewed-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-08-15gn: javascript: Add javascript-diff2html.Alexander_Kabui
* gn/packages/javascript.scm (javascript-diff2html): New package. Reviewed-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-08-15gn: javascript: Update javascript-ace.Alexander_Kabui
* gn/packages/javascript.scm: (javascript-ace): Update License. Apply guix style. Reviewed-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-08-13gn-auth: Update commit and hash.Frederick Muriuki Muriithi
2024-08-08gn-auth: update commit and hash.Frederick Muriuki Muriithi
2024-08-07gn-auth: Update commit and hashFrederick Muriuki Muriithi
Update the hash to pull in fixes for the following ops issues: * Installing of Jinja2 text-file templates for emails * Logging out unhandled exceptions as errors for easier debugging
2024-08-07Production releaseFrederick Muriuki Muriithi
* GN2: 0998033d0a7ea26ed96b00a360a334bae6de8c55 * GN3: efa965c34db3662762dde8ecf376cce561d85453 * GN-AUTH: eb05221f57ec4b6a5537ac7661811ba33b4b0385
2024-08-02rshiny: refactor import code into define-module formjgart
2024-08-02rshiny: add logging for applicationsjgart
2024-07-31genecup: disable debug mode in flask application for productionjgart
2024-07-31mouse-longevity-app: extract the pubmed archive in the packagejgart
2024-07-31gn: Add mouse-longevity-app.jgart
* gn/packages/mouse-longevity.scm (mouse-longevity-app): New variable.
2024-07-31genecup: update urljgart
2024-07-25gn-uploader: (python-flask-session): New dependency.Frederick Muriuki Muriithi
2024-07-25gn-uploader: (python-pymonad): New dependency.Frederick Muriuki Muriithi
2024-07-25gn-uploader: (python-authlib): New dependency.Frederick Muriuki Muriithi
2024-07-17gn-auth and GN2: Update commits and hashes.Frederick Muriuki Muriithi
2024-07-15gn-auth: Add commit and revision to version. Update commit and hash.Frederick Muriuki Muriithi
2024-07-09GN3: update commit and hash.Frederick Muriuki Muriithi
2024-07-08gn-uploader: Add node-resumablejs as a dependency.update-gn3-for-production-containerFrederick Muriuki Muriithi
2024-07-08GN3: update commit and hash.Frederick Muriuki Muriithi
2024-07-06gn: gemma-wrapper: updated to 0.99.7pjotrp
2024-06-28import (gn packages genecup) module.Frederick Muriuki Muriithi
2024-06-28Remove import for missing module.Frederick Muriuki Muriithi
2024-06-28genenetwork-full-system: Do synchronised releaseFrederick Muriuki Muriithi
Do a syncronised release of the genenetwork full system (it's not actually full, since gn-uploader is not yet part of the release, but it's good enough), with the following commits for the various parts: * GeneNetwork2: deb8d7241f1ca05865fababc2799ead9a684f8be * GeneNetwork3: 9f27bdc3ca41e09a090093bc36f48851fcc4fc42 * gn-auth: c8658a764cf30605c6e5a1361dcd09ddd422e371
2024-06-22rename ratspub.scm to genecup.scmShepherd on Tux02
2024-06-21ratspub: remove definitions as they are replaced by genecupShepherd on Tux02
2024-06-21Merge branch 'master' of /home/git/public/guix-bioinformaticsShepherd on Tux02
2024-06-21genecup: fix typopjotrp
2024-06-20Merge branch 'master' of /home/git/public/guix-bioinformaticsShepherd on Tux02
2024-06-20Merge branch 'master' of https://gitlab.com/genenetwork/guix-bioinformaticsShepherd on Tux02
2024-06-20Rename penguin2->tux02Shepherd on Tux02
2024-06-20genecup: use keras without testsPjotr Prins
2024-06-14gn-uploader: (javascript-jquery): New dependencyFrederick Muriuki Muriithi
JQuery is needed to get the bootstrap plugins working correctly.
2024-06-13gn-uploader: javascript-bootstrap: New dependencyFrederick Muriuki Muriithi
Bundle javascript-bootstrap with gn-uploader for styling.
2024-06-12gn-uploader: Fix indentation.Frederick Muriuki Muriithi
2024-05-09Fix path to error GIFs.Munyoki Kilyungi
Co-authored-by: Alexander <alexanderkabua@gmail.com>
2024-04-19gn: Add hifiasm.Arun Isaac
* gn/packages/bioinformatics.scm (hifiasm): New variable.
2024-04-09gn: javascript: Fix failing javascript-xterm build.Munyoki Kilyungi
* gn/packages/javascript.scm (javascript-xterm): Update hash. [native-inputs]: Move this ... [propagated-inputs]: ... here. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-04-05genenetwork2-stable: update hashPjotr Prins
2024-04-04Add recent javascript-d3 libraryPjotr Prins
2024-04-04javascript-d3panels: add variable and add to genenetwork2Pjotr Prins
2024-04-03genenetwork3-stable: update hashPjotr Prins
2024-04-03genenetwork3-stable: modify files that use R scriptsPjotr Prins
generated by cgit v1.2.3 (git 2.44.0) at 2024-11-06 03:35:03 +0000