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2024-06-28genenetwork-full-system: Do synchronised releaseFrederick Muriuki Muriithi
Do a syncronised release of the genenetwork full system (it's not actually full, since gn-uploader is not yet part of the release, but it's good enough), with the following commits for the various parts: * GeneNetwork2: deb8d7241f1ca05865fababc2799ead9a684f8be * GeneNetwork3: 9f27bdc3ca41e09a090093bc36f48851fcc4fc42 * gn-auth: c8658a764cf30605c6e5a1361dcd09ddd422e371
2024-06-14gn-uploader: (javascript-jquery): New dependencyFrederick Muriuki Muriithi
JQuery is needed to get the bootstrap plugins working correctly.
2024-06-13gn-uploader: javascript-bootstrap: New dependencyFrederick Muriuki Muriithi
Bundle javascript-bootstrap with gn-uploader for styling.
2024-06-12gn-uploader: Fix indentation.Frederick Muriuki Muriithi
2024-05-09Fix path to error GIFs.Munyoki Kilyungi
Co-authored-by: Alexander <alexanderkabua@gmail.com>
2024-04-05genenetwork2-stable: update hashPjotr Prins
2024-04-04Add recent javascript-d3 libraryPjotr Prins
2024-04-04javascript-d3panels: add variable and add to genenetwork2Pjotr Prins
2024-04-03genenetwork3-stable: update hashPjotr Prins
2024-04-03genenetwork3-stable: modify files that use R scriptsPjotr Prins
2024-04-03genenetwork3-stable: modify files using R scriptsPjotr Prins
2024-04-03genenetwork3-stable: copy other R scripts into destinationPjotr Prins
2024-04-03genenetwork3-stable: copy R script into destinationPjotr Prins
2024-04-03genenetwork3-stable: patch path to R script - missing bracketPjotr Prins
2024-04-03genenetwork3-stable: patch path to R scriptPjotr Prins
2024-04-02genenetwork3-stable: Update commit and hash.pjotrp
2024-04-02genenetwork3-stable: Update commit and hash.pjotrp
2024-04-02gn-uploader: update commit and hash.Frederick Muriuki Muriithi
2024-04-01gn: genenetwork3-stable: disable testing for nowpjotrp
* gn/packages/genenetwork.scm (genenetwork3-stable) disable testing
2024-04-01gn: genenetwork3: sorted package names and moved python-test and ↵pjotrp
python-test-mock into propagated inputs * gn/packages/genenetwork.scm (genenetwork3) [propagated-inputs]: add testing
2024-04-01gn: Add genenetwork3-production variantpjotrp
* gn/packages/genenetwork.scm (genenetwork3-stable): New variable.
2024-04-01gn: genenetwork3: sorted package names and added R to propagated inputs to ↵pjotrp
make Rscript available on the path * gn/packages/genenetwork.scm (genenetwork3) [propagated-inputs]: Add r.
2024-04-01gn: genenetwork3: reformat package list AND fix tabs2spacespjotrp
* gn/packages/genenetwork.scm (genenetwork3)
2024-03-24genenetwork-stable: fix URL problem R/qtl apipjotrp
2024-03-21gn: genenetwork3: Add python-biopython.Alexander_Kabui
* gn/packages/genenetwork.scm (genenetwork3) [propated-inputs]: Add python-biopython. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-03-21gn-uploader: update commit and hash.Frederick Muriuki Muriithi
2024-03-19Add javascript-linkify, javascript-linkify-html to genenetwork.Alexander_Kabui
* gn/packages/genenetwork.scm (genenetwork2) [propagated-inputs]: Add javacript-linkify and javascript-linkify-html. Acked-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-03-19gn-uploader: update commit and hash.Frederick Muriuki Muriithi
2024-03-15gn-uploader: Update commit and hash.Frederick Muriuki Muriithi
2024-03-13genenetwork2: Update commit and hash - get commit with bugfixes.Frederick Muriuki Muriithi
2024-03-11gn: Add genenetwork2-production variantpjotrp
* gn/packages/genenetwork.scm (genenetwork-stable): New variable.
2024-03-08gn-uploader: Use more modern list-style inputs. Fix version number.Frederick Muriuki Muriithi
2024-03-08gn-uploader: Update package definitionFrederick Muriuki Muriithi
2024-03-06genenetwork2: update commit and hashFrederick Muriuki Muriithi
Removes use of configs from `gn2.utility.tools` module since they are not up to date.
2024-03-05genenetwork2: update commit and hash to fetch configs from appFrederick Muriuki Muriithi
2024-03-05genenetwork2: Fix commit and hash.Frederick Muriuki Muriithi
2024-03-05genenetwork2: Update commit and hash.Frederick Muriuki Muriithi
2024-03-04genenetwork2: Update commit and hash to build with missing templatesFrederick Muriuki Muriithi
2024-03-03gn: xterm: comment out xterm.js package because of suspect sources - the ↵pjotrp
hash value changed. Also needs fixing of the code that uses it in gn2. * gn/packages/genenetwork.scm (xterm.js): Comment out packages
2024-03-02gn-auth: Update the commit and hash.Frederick Muriuki Muriithi
2024-03-01gn: gn-auth: Update to commit 8a20071.Arun Isaac
* gn/packages/genenetwork.scm (gn-auth): Update to commit 8a20071.
2024-02-26gn: gn-auth: Update to commit 10ec3b1.Arun Isaac
* gn/packages/genenetwork.scm (gn-auth): Update to commit 10ec3b1.
2024-02-26gn: gn-auth: Use list-style inputs.Arun Isaac
* gn/packages/genenetwork.scm (gn-auth)[native-inputs, propagated-inputs]: List them directly instead of using an association list.
2024-02-15gn: javascript: Add javascript-uikit.Alexander_Kabui
* gn/packages/javascript.scm: (javascript-uikit): New package. * gn/packages/javascript.scm: (genenetwork2) [propagated-inputs]:Add javascript-uikit.
2024-01-03gnqc-py: Fix syntax error.Frederick Muriuki Muriithi
2024-01-03gn: genenetwork2: Update to 3.11-4.c1d377e.Arun Isaac
* gn/packages/genenetwork.scm (genenetwork2): Update to 3.11-4.c1d377e.
2024-01-03gn: genenetwork3: Update to 0.1.0-5.6bb4a5f.Arun Isaac
* gn/packages/genenetwork.scm (genenetwork3): Update to 0.1.0-5.6bb4a5f.
2024-01-02gn: genenetwork2: Fix path to installed bundled fonts.Arun Isaac
2024-01-02gn: genenetwork2: Install bundled fonts.Arun Isaac
* gn/packages/genenetwork.scm (genenetwork2)[arguments]: Add install-bundled-fonts and fix-font-paths phases.
2024-01-02gn: genenetwork2: Use G-expressions.Arun Isaac
* gn/packages/genenetwork.scm (genenetwork2): Use G-expressions.