Age | Commit message (Collapse) | Author | |
---|---|---|---|
2021-01-31 | gn: javascript: Replace javascript-zxcvbn-async with javascript-zxcvbn | Alexander Kabui | |
Signed-off-by: BonfaceKilz <me@bonfacemunyoki.com> | |||
2021-01-12 | gn: genenetwork1: Create "useralt" and replace "user" with it | BonfaceKilz | |
* gn/packages/genenetwork.scm (genenetwork1): [arguments]: In 'changes-for-deployed-service, copy "web/webqtl/user" to "web/webqtl/useralt" and replace how "user" is imported in "web/webqtl/main.py" | |||
2020-12-15 | gn: rust-handlegraph-0.3, rust-ndarray-0.12 upstreamed | Efraim Flashner | |
2020-12-06 | gn: python3-genenetwork2: Generate svg graph from python3-package | BonfaceKilz | |
* gn/packages/genenetwork.scm (python3-genenetwork2): [native-inputs]: Add graphviz. [arguments]{generate-dag-svg-file}: New phase. | |||
2020-12-06 | gn: python3-genenetwork2: Remove unnecessary begin form | BonfaceKilz | |
* gn/packages/genenetwork.scm (python3-genenetwork2): [arguments] {generate-graph}: Remove begin form. | |||
2020-12-04 | gn: python3-genenetwork2: Generate graph from python3-package | BonfaceKilz | |
* gn/packages/genenetwork.scm: Add new #:use-modules: (guix graph) (guix scripts graph) (guix store) (python3-genenetwork2)[arguments]{generate-graph}: New phase after install that uses d3js to generate a new graph which uses d3js as a backend. | |||
2020-12-04 | gn: python3-genenetwork2: Add package link in generated deps file | BonfaceKilz | |
* gn/packages/genenetwork.scm (python3-genenetwork2): [arguments]{generate-dependency-file}: Add link to "genenetwork.scm" file. | |||
2020-12-02 | gn: python3-genenetwork2: Generate static dependencies file | BonfaceKilz | |
* gn/packages/genenetwork.scm (python3-genenetwork2): [arguments]{generate-dependency-file}: Add new phase after "install" that generates a "DEPENDENCY.md" file which will be displayed in the gn2 web interface. | |||
2020-11-20 | gn: genenetwork2: Remove vim from propagated inputs | BonfaceKilz | |
* gn/packages/genenetwork.scm (genenetwork2): [propagated-inputs]: Remove vim. Right now, building vim fails, thereby causing python3-genenetwork2 to fail. | |||
2020-11-20 | gn: python3-genenetwork: Replace python-mistune with python-markdown | BonfaceKilz | |
2020-11-19 | gn: python3-genenetwork2: Comment out python-flask-socketio | BonfaceKilz | |
* gn/packages/genenetwork.scm (python3-genenetwork2): [propagated-inputs]: Comment out python-flask-socketio. Causes build on Penguin2 to fail. | |||
2020-11-17 | gn: python3-genenetwork2: Add python-flask-socketio | BonfaceKilz | |
* gn/packages/genenetwork.scm (python3-genenetwork2): [propagated-inputs]: Add python-flask-socketio. | |||
2020-11-16 | gn: python3-genenetwork2: Add javascript-ckeditor | BonfaceKilz | |
* gn/packages/genenetwork.scm (python3-genenetwork2): [propagated-inputs]: Add javascript-ckeditor. | |||
2020-11-14 | gn: python3-genenetwork2: Add python-rdflib | BonfaceKilz | |
2020-11-03 | gn: python3-genenetwork2: Add python-beautifulsoup4 | BonfaceKilz | |
* gn/packages/genenetwork.scm [propagated-inputs]: New input. | |||
2020-10-31 | gn: python3-genenetwork2: Add python-mistune as an input | BonfaceKilz | |
* gn/packages/genenetwork.scm (python3-genenetwork2) [propagated-inputs]: New input. | |||
2020-10-31 | gn: Delete genenetwork3 package | BonfaceKilz | |
* gn/packages/genenetwork.scm (genenetwork3): Delete it. The python3 version of genenetwork2 is already packaged as python3-genenetwork2. | |||
2020-10-08 | gn: python3-genenetwork2: Update python-rpy2 input | BonfaceKilz | |
2020-09-23 | gn: Add python2-mysqlclient. | Efraim Flashner | |
2020-09-23 | genenetwork1: Update package and service | Efraim Flashner | |
2020-09-14 | gn: adjust to package movements | Efraim Flashner | |
2020-09-03 | gn: Provide genotypes folder in container. | Efraim Flashner | |
2020-09-03 | python24-qtlreaper: Update to 1.11-gn1.442c217. | Efraim Flashner | |
Also re-indent. | |||
2020-09-03 | move python24-mysqlclient to 1.2.3. | Efraim Flashner | |
2020-08-31 | gn: python3-genenetwork2: Propagate python-mypy | BonfaceKilz | |
2020-08-28 | Add racket to genenetwork2 | pjotrp | |
2020-08-28 | Remove unused packages | pjotrp | |
2020-08-26 | updates | Efraim Flashner | |
2020-08-20 | gn: python3-genenetwork2: Propagate python-rpy2 | BonfaceKilz | |
* gn/packages/genenetwork.scm: (python3-genenetwork2)[propagated-inputs]: Add python-rpy2 | |||
2020-08-19 | gn: Add gfautil. | Efraim Flashner | |
2020-08-18 | genenetwork1: patch more files | Efraim Flashner | |
2020-08-18 | gn: Use local links for genenetwork1. | Efraim Flashner | |
2020-08-10 | gn: genenetwork2: Add pillow as one of the propagated-inputs | BonfaceKilz | |
* gn/packages/genenetwork.scm (genenetwork2)[propagated-inputs]: Add python2-pillow | |||
2020-08-05 | gn: python3-genenetwork2: Update package definition | BonfaceKilz | |
* gn/packages/genenetwork.scm (python3-genenetwork2): [source]: Use github source tree to avoid build failures in `setup.py` which used old python 2 syntax. [propagated-inputs]: Use python-wrapper that maps `python3` command to `python`. Remove "python" from inherited propagated input. Remove unittest2 and mock inputs since they are already defined in python3's standard library. [arguments]: Inherit package arguments from genenetwork2 and only update '#phases and '#python args. | |||
2020-08-04 | gn: python3-genenetwork2: Remove hard coded variables | BonfaceKilz | |
* gn/packages/genenetwork.scm (python3-genenetwork2): Use a filter to get the lists of packages to delete from the inherited propagated input. | |||
2020-08-04 | gn: genenetwork2: Remove duplicate python2-scipy input | BonfaceKilz | |
* gn/packages/genenetwork.scm (genenetwork2): Remove duplicate propagated-input | |||
2020-08-04 | gn: python3-genenetwork2: Inherit from genenetwork2 | BonfaceKilz | |
* gn/packages/genenetwork.scm (python3-genenetwork2): Rewrite package definiton to inherit from genenetwork2 package. | |||
2020-08-04 | Merge branch 'build/python3-migration' | BonfaceKilz | |
2020-08-04 | gn: python3-genenetwork: Rename unittest2 input | BonfaceKilz | |
2020-08-04 | gn: python3-genenetwork2: Remove duplicate requests input | BonfaceKilz | |
* gn/packages/genenetwork.scm (python3-genenetwork2): Delete duplicate input | |||
2020-08-04 | gn: python3-genenetwork2: Remove unnecessary comments | BonfaceKilz | |
2020-08-04 | gn: python3-genenetwork2: Remove python2-parallel | BonfaceKilz | |
* gn/packages/genenetwork.scm (python3-genenetwork): Remove deprecated package | |||
2020-08-04 | gn: python3-genenetwork2: Remove python-qtlreaper | BonfaceKilz | |
* gn/packages/genenetwork.scm (python3-genenetwork2): Remove deprecated python2-qtlreaper | |||
2020-08-04 | gn: python3-genenetwork2: Add new package definition | BonfaceKilz | |
* gn/packages/genenetwork.scm (python3-genenetwork2): Add it. Same as genenetwork2 for now. | |||
2020-08-03 | gn: Move graphviz-2.26 to guix-past | Efraim Flashner | |
2020-08-02 | genenetwork1: Connect to the database | Efraim Flashner | |
2020-08-02 | gn: Update crates for upstream name changes | Efraim Flashner | |
2020-07-26 | A running genenetwork | Efraim Flashner | |
2020-07-24 | genenetwork2: rename unittest2 input | BonfaceKilz | |
2020-07-24 | genenetwork2: add python2-mock and python-nose2 for easier testing | BonfaceKilz | |