diff options
Diffstat (limited to 'gn/packages/bioinformatics.scm')
| -rw-r--r-- | gn/packages/bioinformatics.scm | 25 |
1 files changed, 25 insertions, 0 deletions
diff --git a/gn/packages/bioinformatics.scm b/gn/packages/bioinformatics.scm index 2832ea6..c3e5020 100644 --- a/gn/packages/bioinformatics.scm +++ b/gn/packages/bioinformatics.scm @@ -4460,3 +4460,28 @@ automatically vectorize for different architectures without adapting the code.") (substitute-keyword-arguments (package-arguments wfa2-lib) ((#:make-flags flags ''()) #~(cons "CC_FLAGS+=-static" #$flags)))))) + +(define-public r-rrbgen + (package + (name "r-stitch") + (version "0.0.6") + (source + (origin + (method url-fetch) + (uri (string-append "https://github.com/rwdavies/rrbgen/releases/download/" + version "/rrbgen_" version ".tar.gz")) + (sha256 + (base32 + "1vhqy8licl2pkzar4aag0q5fhnb3fdch8acyjh9445ia42z01z9c")))) + (build-system r-build-system) + (propagated-inputs + (list r-rcpp + r-rcpparmadillo)) + (home-page "https://github.com/rwdavies/rrbgen") + (synopsis "Lightweight limited functionality R bgen read/write library") + (description "@code{r-rrbgen} supports v1.3 of the bgen format. It supports reading +and writing using 8, 16, 24 or 32 bits per probability, using Layout = +2 and CompressedSNPBlocks = 1, for bi-allelic SNPs with samples of +ploidy 2. Any other format specification may crash unexpectedly +without a properly defined error.") + (license license:gpl3))) |