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authorPjotr Prins2026-06-02 10:39:23 +0000
committerPjotr Prins2026-06-02 10:39:23 +0000
commite586976ac493d2f7480784f098d58c9fed065b02 (patch)
tree23c02956067aaedc132ca4f7c33bfb0008b93ab6 /scripts/create-docker-pangenome-tools.sh
parent338c2008c04ebe91b48982c14b06f71de13cd967 (diff)
parent2d2bf39bf30d4d68cd31b38555620aa14a0c5bca (diff)
downloadguix-bioinformatics-main.tar.gz
Merge HEAD main
Diffstat (limited to 'scripts/create-docker-pangenome-tools.sh')
-rwxr-xr-xscripts/create-docker-pangenome-tools.sh24
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diff --git a/scripts/create-docker-pangenome-tools.sh b/scripts/create-docker-pangenome-tools.sh
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+++ b/scripts/create-docker-pangenome-tools.sh
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+#!/bin/sh
+# Build a Docker image (tar.gz, loadable via `docker load`) of
+# mempang-workshop plus a minimal shell environment, and drop a copy
+# in ~/tmp.  See lib-pangenome-pack.sh for the naming convention and
+# outputs.
+#
+# Usage: scripts/create-docker-pangenome-tools.sh
+#        docker load < ~/tmp/<the-tar.gz>
+#        docker run --rm -it pangenome-tools:<GBHASH>
+
+. "$(dirname "$0")/lib-pangenome-pack.sh"
+
+pangenome_pack docker tar.gz docker
+pangenome_write_outputs
+
+echo
+echo "Docker image ready:"
+ls -lh "$PACK_TARGET"
+echo "md5sum:    $MD5SUM_FILE"
+echo "inventory: $INVENTORY"
+echo
+echo "Run with:"
+echo "  docker load < $PACK_TARGET"
+echo "  docker run --rm -it pangenome-tools:$GB_HASH"