update julia-visuals

author: Efraim Flashner 2023-09-06 14:48:43 +0300
committer: Efraim Flashner 2023-09-19 12:59:33 +0300
commit: 382df9849ed64d6ef2ea6ecafbfb090ad49928eb (patch)
tree: 6c5d0ef5462d1decf14583e9d1ad5f4d226a321b /julia-visuals-remove-manifests.diff
parent: ea986e95f6b2f66268a53a34945d858130bff018 (diff)
download: guix-bioinformatics-382df9849ed64d6ef2ea6ecafbfb090ad49928eb.tar.gz
1 files changed, 10151 insertions, 0 deletions
diff --git a/julia-visuals-remove-manifests.diff b/julia-visuals-remove-manifests.diff
new file mode 100644
index 0000000..358c42f
--- /dev/null
+++ b/julia-visuals-remove-manifests.diff
@@ -0,0 +1,10151 @@
+diff --git a/notebooks/L1-penalty.jl b/notebooks/L1-penalty.jl
+index 9f3d64b..7f1c4ee 100644
+--- a/notebooks/L1-penalty.jl
++++ b/notebooks/L1-penalty.jl
+@@ -140,1106 +140,6 @@ Plots = "~1.25.4"
+ PlutoUI = "~0.7.29"
+ """
+ 
+-# ╔═╡ 00000000-0000-0000-0000-000000000002
+-PLUTO_MANIFEST_TOML_CONTENTS = """
+-# This file is machine-generated - editing it directly is not advised
+-
+-julia_version = "1.8.1"
+-manifest_format = "2.0"
+-project_hash = "7e66a529aecc117666fc78bb2f204d6081a02e1c"
+-
+-[[deps.AbstractPlutoDingetjes]]
+-deps = ["Pkg"]
+-git-tree-sha1 = "8eaf9f1b4921132a4cff3f36a1d9ba923b14a481"
+-uuid = "6e696c72-6542-2067-7265-42206c756150"
+-version = "1.1.4"
+-
+-[[deps.Adapt]]
+-deps = ["LinearAlgebra"]
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+-uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e"
+-version = "3.4.0"
+-
+-[[deps.ArgTools]]
+-uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f"
+-version = "1.1.1"
+-
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+-version = "0.1.28"
+-
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+-
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+-
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+-[[deps.x264_jll]]
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+-git-tree-sha1 = "9ebfc140cc56e8c2156a15ceac2f0302e327ac0a"
+-uuid = "d8fb68d0-12a3-5cfd-a85a-d49703b185fd"
+-version = "1.4.1+0"
+-"""
+-
+ # ╔═╡ Cell order:
+ # ╟─e52889b0-9d46-11eb-33f1-cf0665f314a7
+ # ╟─7a97d5bb-9871-454c-a0be-ed54a54aab12
+diff --git a/notebooks/bayes.jl b/notebooks/bayes.jl
+index 6a8f571..00c366b 100644
+--- a/notebooks/bayes.jl
++++ b/notebooks/bayes.jl
+@@ -234,1315 +234,6 @@ PlutoUI = "~0.7.40"
+ Roots = "~2.0.3"
+ """
+ 
+-# ╔═╡ 00000000-0000-0000-0000-000000000002
+-PLUTO_MANIFEST_TOML_CONTENTS = """
+-# This file is machine-generated - editing it directly is not advised
+-
+-julia_version = "1.8.1"
+-manifest_format = "2.0"
+-project_hash = "a550497986d35346ecad5959b6be1dacedb1cc51"
+-
+-[[deps.AbstractFFTs]]
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+-uuid = "621f4979-c628-5d54-868e-fcf4e3e8185c"
+-version = "1.2.1"
+-
+-[[deps.AbstractPlutoDingetjes]]
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+-git-tree-sha1 = "8eaf9f1b4921132a4cff3f36a1d9ba923b14a481"
+-uuid = "6e696c72-6542-2067-7265-42206c756150"
+-version = "1.1.4"
+-
+-[[deps.AbstractTrees]]
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+-version = "0.4.2"
+-
+-[[deps.Adapt]]
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+-version = "3.4.0"
+-
+-[[deps.Animations]]
+-deps = ["Colors"]
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+-version = "0.4.1"
+-
+-[[deps.ArgTools]]
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+-
+-[[deps.Automa]]
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+-
+-[[deps.AxisAlgorithms]]
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+-uuid = "13072b0f-2c55-5437-9ae7-d433b7a33950"
+-version = "1.0.1"
+-
+-[[deps.Base64]]
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+-
+-[[deps.Bzip2_jll]]
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+-
+-[[deps.CEnum]]
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+-
+-[[deps.Cairo]]
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+-uuid = "159f3aea-2a34-519c-b102-8c37f9878175"
+-version = "1.0.5"
+-
+-[[deps.CairoMakie]]
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+-"""
+-
+ # ╔═╡ Cell order:
+ # ╟─c3344b73-51bd-4c59-a987-e0adfcc282ea
+ # ╟─5bccbb9b-e69f-4c30-93b8-57e2d153c772
+diff --git a/notebooks/clt.jl b/notebooks/clt.jl
+index 7082094..a935494 100644
+--- a/notebooks/clt.jl
++++ b/notebooks/clt.jl
+@@ -99,1104 +99,6 @@ Plots = "~1.32.1"
+ PlutoUI = "~0.7.40"
+ """
+ 
+-# ╔═╡ 00000000-0000-0000-0000-000000000002
+-PLUTO_MANIFEST_TOML_CONTENTS = """
+-# This file is machine-generated - editing it directly is not advised
+-
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+-uuid = "d8fb68d0-12a3-5cfd-a85a-d49703b185fd"
+-version = "1.4.1+0"
+-"""
+-
+ # ╔═╡ Cell order:
+ # ╟─ef2627bc-30a7-11ed-29fb-395b23c794b4
+ # ╟─b9eb712a-0329-49ba-9409-d5c5a155c112
+diff --git a/notebooks/disease-testing.jl b/notebooks/disease-testing.jl
+index b5fd722..4aa5c4a 100644
+--- a/notebooks/disease-testing.jl
++++ b/notebooks/disease-testing.jl
+@@ -154,1257 +154,6 @@ Distributions = "~0.25.75"
+ PlutoUI = "~0.7.43"
+ """
+ 
+-# ╔═╡ 00000000-0000-0000-0000-000000000002
+-PLUTO_MANIFEST_TOML_CONTENTS = """
+-# This file is machine-generated - editing it directly is not advised
+-
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+-manifest_format = "2.0"
+-project_hash = "fcf69300a3d26809fba645c97b613b229d740f40"
+-
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+-version = "1.2.1"
+-
+-[[deps.AbstractPlutoDingetjes]]
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+-uuid = "6e696c72-6542-2067-7265-42206c756150"
+-version = "1.1.4"
+-
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+-uuid = "1520ce14-60c1-5f80-bbc7-55ef81b5835c"
+-version = "0.4.4"
+-
+-[[deps.Adapt]]
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+-uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e"
+-version = "3.5.0"
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+-[[deps.Animations]]
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+-version = "0.4.1"
+-
+-[[deps.ArgTools]]
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+-
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+-
+-[[deps.CEnum]]
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+-
+-[[deps.CairoMakie]]
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+-
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+-"""
+-
+ # ╔═╡ Cell order:
+ # ╟─c3344b73-51bd-4c59-a987-e0adfcc282ea
+ # ╟─1b945a07-252b-429f-bc29-437bb05ed1e8
+diff --git a/notebooks/distributions.jl b/notebooks/distributions.jl
+index 7d5cdf3..825217b 100644
+--- a/notebooks/distributions.jl
++++ b/notebooks/distributions.jl
+@@ -184,1042 +184,6 @@ Plots = "~1.35.3"
+ PlutoUI = "~0.7.46"
+ """
+ 
+-# ╔═╡ 00000000-0000-0000-0000-000000000002
+-PLUTO_MANIFEST_TOML_CONTENTS = """
+-# This file is machine-generated - editing it directly is not advised
+-
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+-
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+-deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"]
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+-[[deps.Xorg_libpthread_stubs_jll]]
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+-[[deps.Xorg_libxcb_jll]]
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+-[[deps.Xorg_libxkbfile_jll]]
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+-[[deps.Xorg_xcb_util_image_jll]]
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+-[[deps.Xorg_xcb_util_jll]]
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+-[[deps.xkbcommon_jll]]
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+-uuid = "d8fb68d0-12a3-5cfd-a85a-d49703b185fd"
+-version = "1.4.1+0"
+-"""
+-
+ # ╔═╡ Cell order:
+ # ╟─5e5914fa-c9e7-4dec-a9a8-d6ba15d0a90c
+ # ╟─8229f9da-4f0f-11ed-1349-ef269c9c2704
+diff --git a/notebooks/flips.jl b/notebooks/flips.jl
+index 7a7bc4c..27a9581 100644
+--- a/notebooks/flips.jl
++++ b/notebooks/flips.jl
+@@ -126,1063 +126,6 @@ PlutoUI = "~0.7.40"
+ PrettyTables = "~2.1.0"
+ """
+ 
+-# ╔═╡ 00000000-0000-0000-0000-000000000002
+-PLUTO_MANIFEST_TOML_CONTENTS = """
+-# This file is machine-generated - editing it directly is not advised
+-
+-julia_version = "1.8.1"
+-manifest_format = "2.0"
+-project_hash = "f8f2952378978d7572c9df3a8a9013b9291d03b8"
+-
+-[[deps.AbstractPlutoDingetjes]]
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+-
+-[[deps.Base64]]
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+-
+-[[deps.BitFlags]]
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+-uuid = "d8fb68d0-12a3-5cfd-a85a-d49703b185fd"
+-version = "1.4.1+0"
+-"""
+-
+ # ╔═╡ Cell order:
+ # ╟─7bb5a5cf-e386-440a-9310-f72d95a38c43
+ # ╟─8c45a6ca-80c4-4066-8b5f-6fb28182e768
+diff --git a/notebooks/power.jl b/notebooks/power.jl
+index b0071a3..7af3786 100644
+--- a/notebooks/power.jl
++++ b/notebooks/power.jl
+@@ -113,1042 +113,6 @@ Plots = "~1.35.2"
+ PlutoUI = "~0.7.43"
+ """
+ 
+-# ╔═╡ 00000000-0000-0000-0000-000000000002
+-PLUTO_MANIFEST_TOML_CONTENTS = """
+-# This file is machine-generated - editing it directly is not advised
+-
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+-[[deps.x264_jll]]
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+-git-tree-sha1 = "9ebfc140cc56e8c2156a15ceac2f0302e327ac0a"
+-uuid = "d8fb68d0-12a3-5cfd-a85a-d49703b185fd"
+-version = "1.4.1+0"
+-"""
+-
+ # ╔═╡ Cell order:
+ # ╟─33afb7f3-e52a-4f49-8be2-8634c66db010
+ # ╟─1d5602ee-5f7b-42ec-b8e0-c9f2bd2c5b94
+diff --git a/notebooks/prox.jl b/notebooks/prox.jl
+index 22de773..4ad70ae 100644
+--- a/notebooks/prox.jl
++++ b/notebooks/prox.jl
+@@ -184,1135 +184,6 @@ Plots = "~1.32.1"
+ PlutoUI = "~0.7.40"
+ """
+ 
+-# ╔═╡ 00000000-0000-0000-0000-000000000002
+-PLUTO_MANIFEST_TOML_CONTENTS = """
+-# This file is machine-generated - editing it directly is not advised
+-
+-julia_version = "1.8.1"
+-manifest_format = "2.0"
+-project_hash = "b18bb334f7da6eec2d52e8fadc201d8c164e838d"
+-
+-[[deps.AbstractPlutoDingetjes]]
+-deps = ["Pkg"]
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+-version = "1.1.4"
+-
+-[[deps.Adapt]]
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+-
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+-
+-[[deps.ArrayInterfaceCore]]
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+-
+-[[deps.Base64]]
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+-
+-[[deps.BitFlags]]
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+-
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+-
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+-[[deps.ChainRulesCore]]
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+-
+-[[deps.ChangesOfVariables]]
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+-
+-[[deps.CodecZlib]]
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+-version = "0.7.0"
+-
+-[[deps.ColorSchemes]]
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+-version = "3.20.0"
+-
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+-
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+-
+-[[deps.Colors]]
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+-uuid = "5ae59095-9a9b-59fe-a467-6f913c188581"
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+-
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+-
+-[[deps.Compat]]
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+-uuid = "d8fb68d0-12a3-5cfd-a85a-d49703b185fd"
+-version = "1.4.1+0"
+-"""
+-
+ # ╔═╡ Cell order:
+ # ╟─b216d222-3405-4f51-94f5-d5079c77fe9f
+ # ╟─0633f88f-e899-4170-badd-396c4cea3080
+diff --git a/notebooks/roc.jl b/notebooks/roc.jl
+index f68bc58..597617a 100644
+--- a/notebooks/roc.jl
++++ b/notebooks/roc.jl
+@@ -110,1042 +110,6 @@ PlutoUI = "~0.7.43"
+ QuadGK = "~2.5.0"
+ """
+ 
+-# ╔═╡ 00000000-0000-0000-0000-000000000002
+-PLUTO_MANIFEST_TOML_CONTENTS = """
+-# This file is machine-generated - editing it directly is not advised
+-
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+-
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+-
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+-deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "HarfBuzz_jll", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"]
+-git-tree-sha1 = "5982a94fcba20f02f42ace44b9894ee2b140fe47"
+-uuid = "0ac62f75-1d6f-5e53-bd7c-93b484bb37c0"
+-version = "0.15.1+0"
+-
+-[[deps.libblastrampoline_jll]]
+-deps = ["Artifacts", "Libdl", "OpenBLAS_jll"]
+-uuid = "8e850b90-86db-534c-a0d3-1478176c7d93"
+-version = "5.1.1+0"
+-
+-[[deps.libfdk_aac_jll]]
+-deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
+-git-tree-sha1 = "daacc84a041563f965be61859a36e17c4e4fcd55"
+-uuid = "f638f0a6-7fb0-5443-88ba-1cc74229b280"
+-version = "2.0.2+0"
+-
+-[[deps.libpng_jll]]
+-deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"]
+-git-tree-sha1 = "94d180a6d2b5e55e447e2d27a29ed04fe79eb30c"
+-uuid = "b53b4c65-9356-5827-b1ea-8c7a1a84506f"
+-version = "1.6.38+0"
+-
+-[[deps.libvorbis_jll]]
+-deps = ["Artifacts", "JLLWrappers", "Libdl", "Ogg_jll", "Pkg"]
+-git-tree-sha1 = "b910cb81ef3fe6e78bf6acee440bda86fd6ae00c"
+-uuid = "f27f6e37-5d2b-51aa-960f-b287f2bc3b7a"
+-version = "1.3.7+1"
+-
+-[[deps.nghttp2_jll]]
+-deps = ["Artifacts", "Libdl"]
+-uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d"
+-version = "1.48.0+0"
+-
+-[[deps.p7zip_jll]]
+-deps = ["Artifacts", "Libdl"]
+-uuid = "3f19e933-33d8-53b3-aaab-bd5110c3b7a0"
+-version = "17.4.0+0"
+-
+-[[deps.x264_jll]]
+-deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
+-git-tree-sha1 = "4fea590b89e6ec504593146bf8b988b2c00922b2"
+-uuid = "1270edf5-f2f9-52d2-97e9-ab00b5d0237a"
+-version = "2021.5.5+0"
+-
+-[[deps.x265_jll]]
+-deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
+-git-tree-sha1 = "ee567a171cce03570d77ad3a43e90218e38937a9"
+-uuid = "dfaa095f-4041-5dcd-9319-2fabd8486b76"
+-version = "3.5.0+0"
+-
+-[[deps.xkbcommon_jll]]
+-deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Wayland_jll", "Wayland_protocols_jll", "Xorg_libxcb_jll", "Xorg_xkeyboard_config_jll"]
+-git-tree-sha1 = "9ebfc140cc56e8c2156a15ceac2f0302e327ac0a"
+-uuid = "d8fb68d0-12a3-5cfd-a85a-d49703b185fd"
+-version = "1.4.1+0"
+-"""
+-
+ # ╔═╡ Cell order:
+ # ╟─33afb7f3-e52a-4f49-8be2-8634c66db010
+ # ╟─70919378-b4d7-11eb-2d76-db01c83f87b8
author	Efraim Flashner	2023-09-06 14:48:43 +0300
committer	Efraim Flashner	2023-09-19 12:59:33 +0300
commit	382df9849ed64d6ef2ea6ecafbfb090ad49928eb (patch)
tree	6c5d0ef5462d1decf14583e9d1ad5f4d226a321b /julia-visuals-remove-manifests.diff
parent	ea986e95f6b2f66268a53a34945d858130bff018 (diff)
download	guix-bioinformatics-382df9849ed64d6ef2ea6ecafbfb090ad49928eb.tar.gz