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| author | pjotrp | 2018-07-14 10:43:53 +0000 |
|---|---|---|
| committer | pjotrp | 2018-07-14 10:43:53 +0000 |
| commit | 99718d253ec9ed8ed836f0a348381a7cd83d4b9f (patch) | |
| tree | 722a7c77e26ad390d0a6432174e89fe1526559a9 /gn/packages/gemma.scm | |
| parent | f7a4bbf655bb255df46228f04cc191c1f08f198b (diff) | |
| download | guix-bioinformatics-99718d253ec9ed8ed836f0a348381a7cd83d4b9f.tar.gz | |
Update dependencies for building gemma
Diffstat (limited to 'gn/packages/gemma.scm')
| -rw-r--r-- | gn/packages/gemma.scm | 16 |
1 files changed, 14 insertions, 2 deletions
diff --git a/gn/packages/gemma.scm b/gn/packages/gemma.scm index 973a077..e3a03c6 100644 --- a/gn/packages/gemma.scm +++ b/gn/packages/gemma.scm @@ -31,6 +31,7 @@ #:use-module (gnu packages file) #:use-module (gnu packages gawk) #:use-module (gnu packages gcc) + #:use-module (gnu packages gdb) #:use-module (gnu packages graphviz) #:use-module (gnu packages java) #:use-module (gnu packages ldc) @@ -334,8 +335,19 @@ association studies (GWAS).") ("source" ,source))) (inputs `(("sassc" ,sassc))) (propagated-inputs - `(("gemma-wrapper" ,gemma-wrapper) - ;; ("gcc" ,gcc-8) + `(("binutils" ,binutils) ; for ld + ("gemma-gn2" ,gemma-gn2-git) + ; ("gemma-wrapper" ,gemma-wrapper) + ("gcc" ,gcc-7) + ("gdb" ,gdb) + ("gfortran:lib" ,gfortran "lib") + ("glibc" ,glibc) ; for crt1.o + ("gsl" ,gsl) + ("eigen" ,eigen) + ("linux-libre-headers" ,linux-libre-headers) + ("openblas" ,openblas-git) + ("shunit2" ,shunit2) + ("zlib" ,zlib) )) (arguments `(#:modules ((guix build utils)) |