From 99718d253ec9ed8ed836f0a348381a7cd83d4b9f Mon Sep 17 00:00:00 2001
From: pjotrp
Date: Sat, 14 Jul 2018 10:43:53 +0000
Subject: Update dependencies for building gemma

---
 gn/packages/gemma.scm | 16 ++++++++++++++--
 1 file changed, 14 insertions(+), 2 deletions(-)

(limited to 'gn/packages/gemma.scm')

diff --git a/gn/packages/gemma.scm b/gn/packages/gemma.scm
index 973a077..e3a03c6 100644
--- a/gn/packages/gemma.scm
+++ b/gn/packages/gemma.scm
@@ -31,6 +31,7 @@
   #:use-module (gnu packages file)
   #:use-module (gnu packages gawk)
   #:use-module (gnu packages gcc)
+  #:use-module (gnu packages gdb)
   #:use-module (gnu packages graphviz)
   #:use-module (gnu packages java)
   #:use-module (gnu packages ldc)
@@ -334,8 +335,19 @@ association studies (GWAS).")
                      ("source" ,source)))
     (inputs `(("sassc" ,sassc)))
     (propagated-inputs
-     `(("gemma-wrapper" ,gemma-wrapper)
-        ;; ("gcc" ,gcc-8)
+     `(("binutils" ,binutils) ; for ld
+       ("gemma-gn2" ,gemma-gn2-git)
+       ; ("gemma-wrapper" ,gemma-wrapper)
+       ("gcc" ,gcc-7)
+       ("gdb" ,gdb)
+       ("gfortran:lib" ,gfortran "lib")
+       ("glibc" ,glibc) ; for crt1.o
+       ("gsl" ,gsl)
+       ("eigen" ,eigen)
+       ("linux-libre-headers" ,linux-libre-headers)
+       ("openblas" ,openblas-git)
+       ("shunit2" ,shunit2)
+       ("zlib" ,zlib)
        ))
     (arguments
      `(#:modules ((guix build utils))
-- 
cgit v1.2.3