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| author | Efraim Flashner | 2023-09-26 17:11:58 +0300 |
|---|---|---|
| committer | Efraim Flashner | 2023-09-26 17:11:58 +0300 |
| commit | 29633fd3a8bafce405bba487802cd3720e642d11 (patch) | |
| tree | f511ecd634018e6b7266bdfca28e62567dc2e6a4 /gn/packages/bioinformatics.scm | |
| parent | 0d8ed9f6c2ca7804a73028c947db0a2a6a61e7cb (diff) | |
| download | guix-bioinformatics-29633fd3a8bafce405bba487802cd3720e642d11.tar.gz | |
pggb: Add missing inputs
Diffstat (limited to 'gn/packages/bioinformatics.scm')
| -rw-r--r-- | gn/packages/bioinformatics.scm | 8 |
1 files changed, 6 insertions, 2 deletions
diff --git a/gn/packages/bioinformatics.scm b/gn/packages/bioinformatics.scm index 535018b..9de6ad8 100644 --- a/gn/packages/bioinformatics.scm +++ b/gn/packages/bioinformatics.scm @@ -2717,7 +2717,8 @@ multiple sequence alignment.") '#$(map (lambda (label) (or (this-package-input (string-append label "-hwcaps")) (this-package-input label))) - (list "bcftools" + (list "bc" + "bcftools" "bedtools" "gfaffix" "htslib" @@ -2735,6 +2736,7 @@ multiple sequence alignment.") "samtools" "seqwish" "smoothxg" + "time" "vcfbub" "vcflib" "vg" @@ -2752,7 +2754,8 @@ multiple sequence alignment.") (("/usr/local/bin/nucmer2vcf.R") (string-append out "/bin/nucmer2vcf.R"))))))))) (inputs - (list bcftools + (list bc + bcftools bedtools gfaffix guile-3.0 ; for wrap-script @@ -2772,6 +2775,7 @@ multiple sequence alignment.") samtools seqwish smoothxg + time vcfbub vcflib vg |