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| author | Pjotr Prins | 2015-09-18 14:25:01 +0900 |
|---|---|---|
| committer | Pjotr Prins | 2015-09-18 14:25:01 +0900 |
| commit | 3755985780e155f2f52641e700d928a0a9e8f8a1 (patch) | |
| tree | 5613e2b0a488200519b622eb37245f7bbbd12e20 /README.md | |
| parent | 3dabef24b6d27ca682f25fbff0d6e6fe7d7ccc2e (diff) | |
| download | guix-bioinformatics-3755985780e155f2f52641e700d928a0a9e8f8a1.tar.gz | |
README for CWL
Diffstat (limited to 'README.md')
| -rw-r--r-- | README.md | 8 |
1 files changed, 6 insertions, 2 deletions
@@ -6,13 +6,17 @@ See [Guix Notes](https://github.com/pjotrp/guix-notes/blob/master/HACKING.org) f Set the GUIX_PACKAGE_PATH to point to the root of this directory before running Guix. E.g. -: env GUIX_PACKAGE_PATH=../guix-bioinformatics/ guix package -A cwl + env GUIX_PACKAGE_PATH=$genenetwork/guix-bioinformatics/ guix package -A cwl or from the checked out Guix repo -: env GUIX_PACKAGE_PATH=../guix-bioinformatics/ ./pre-inst-env guix package -A cwl + env GUIX_PACKAGE_PATH=$genenetwork/guix-bioinformatics/ ./pre-inst-env guix package -A cwl Some of these package definitions should make it upstream into the GNU Guix repository when tested and stable. +## Specific packages +Install the common workflow language tool cwltool with + + env GUIX_PACKAGE_PATH=$genenetwork/guix-bioinformatics/ ./pre-inst-env guix package -i python2-cwltool |