From 3755985780e155f2f52641e700d928a0a9e8f8a1 Mon Sep 17 00:00:00 2001
From: Pjotr Prins
Date: Fri, 18 Sep 2015 14:25:01 +0900
Subject: README for CWL

---
 README.md | 8 ++++++--
 1 file changed, 6 insertions(+), 2 deletions(-)

(limited to 'README.md')

diff --git a/README.md b/README.md
index 94ca0ed..1d19b7c 100644
--- a/README.md
+++ b/README.md
@@ -6,13 +6,17 @@ See [Guix Notes](https://github.com/pjotrp/guix-notes/blob/master/HACKING.org) f
 Set the GUIX_PACKAGE_PATH to point to the root of this directory
 before running Guix. E.g.
 
-: env GUIX_PACKAGE_PATH=../guix-bioinformatics/ guix package -A cwl
+    env GUIX_PACKAGE_PATH=$genenetwork/guix-bioinformatics/ guix package -A cwl
 
 or from the checked out Guix repo
 
-: env GUIX_PACKAGE_PATH=../guix-bioinformatics/ ./pre-inst-env guix package -A cwl
+    env GUIX_PACKAGE_PATH=$genenetwork/guix-bioinformatics/ ./pre-inst-env guix package -A cwl
 
 Some of these package definitions should make it upstream into the GNU
 Guix repository when tested and stable.
 
+## Specific packages
 
+Install the common workflow language tool cwltool with
+
+    env GUIX_PACKAGE_PATH=$genenetwork/guix-bioinformatics/ ./pre-inst-env guix package -i python2-cwltool
-- 
cgit v1.2.3