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| author | pjotrp | 2017-01-21 07:09:49 +0000 |
|---|---|---|
| committer | pjotrp | 2017-01-21 07:09:49 +0000 |
| commit | 5fa0e726f7e76ebe7dc098fb3fc786f7ce67d540 (patch) | |
| tree | 7c26f79484f200315f94d297a4d5632425375cd8 | |
| parent | 2b219d0f250019c86aa1ff2466d511655bdb4daa (diff) | |
| download | guix-bioinformatics-5fa0e726f7e76ebe7dc098fb3fc786f7ce67d540.tar.gz | |
Debug version of sambamba
| -rw-r--r-- | gn/packages/bioinformatics.scm | 7 |
1 files changed, 3 insertions, 4 deletions
diff --git a/gn/packages/bioinformatics.scm b/gn/packages/bioinformatics.scm index c1c1a2c..5d6f04d 100644 --- a/gn/packages/bioinformatics.scm +++ b/gn/packages/bioinformatics.scm @@ -921,20 +921,19 @@ association studies (GWAS).") (license license:gpl3)))) (define-public sambamba - (let ((commit "7518a1ff0f07f2013601c05564e1ad1256b479da")) + (let ((commit "5a33d571339c966477c1f70ed08f64051f7b41c1")) (package (name "sambamba") (version (string-append "0.6.5-" (string-take commit 7))) (source (origin (method git-fetch) (uri (git-reference - ;; (url "https://github.com/roelj/sambamba.git") (url "https://github.com/pjotrp/sambamba.git") (commit commit))) (file-name (string-append name "-" version "-checkout")) (sha256 (base32 - "14wpj05hycz9fqrzc2mqx5vl4h42kx1sms9dqpapz46vwc2d0zz3")))) + "05nlhwjw17igcwiz4pq0r4f8flrqcy4065fhx4nhpc0g65p70mi5")))) (build-system gnu-build-system) (native-inputs `(("ldc" ,ldc) @@ -996,7 +995,7 @@ association studies (GWAS).") (replace 'build (lambda* (#:key inputs make-flags #:allow-other-keys) - (zero? (system* "make" "-f" "Makefile.guix" "sambamba-ldmd2" "CC=gcc" "D_COMPILER=ldc2" + (zero? (system* "make" "-f" "Makefile.guix" "sambamba-ldmd2-debug" "CC=gcc" "D_COMPILER=ldc2" (string-append "LDC_LIB_PATH=" (assoc-ref inputs "ldc") "/lib"))))) |