gn-uploader - gn-uploader: Data uploader for GeneNetwork

Age	Commit message (Collapse)	Author
5 days	Fix typos.	Frederick Muriuki Muriithi

5 days	Lint: Fix myriad of linting issues	Frederick Muriuki Muriithi

5 days	Provide missing database connection.	Frederick Muriuki Muriithi

5 days	Create new genotype datasets.	Frederick Muriuki Muriithi

5 days	PoC: Common checks in decorators work.	Frederick Muriuki Muriithi

5 days	Handle common checks in one place.	Frederick Muriuki Muriithi
	The checks for species and population are (before this commit) repeated over and over in different parts of the code. This commit extracts that common functionality into decorators in a new module.
5 days	Fix check.	Frederick Muriuki Muriithi

6 days	Respond to UI actions even for unimplemented links.	Frederick Muriuki Muriithi

6 days	Add placeholder for background jobs.	Frederick Muriuki Muriithi

6 days	Add notes on handling datasets and studies.	Frederick Muriuki Muriithi

6 days	Put "Expression Data" next to related "Individual Data"	Frederick Muriuki Muriithi
	My current understanding of the data leads me to the conclusion that the term "Expression Data" indicates the superset of data that includes the "Individual data", "Average/SE data" etc. For easier tracking, I have grouped the two links next to each other for now.
6 days	Use function from `uploader.platforms` package	Frederick Muriuki Muriithi
	Reuse the function from the `uploader.platforms.models` module. This reduces duplication, and also helps with ensuring robustness of the code — the function actually checks to ensure the platform relates to the selected species.
6 days	Redirect to listing page for now — remove extra endpoint.	Frederick Muriuki Muriithi
	Until I know whether or not we'll be needing the extra "view platform" feature, I've elected to remove the endpoint for now.
6 days	Fix typo.	Frederick Muriuki Muriithi

6 days	Commit forgotten rqtl2.py module	Frederick Muriuki Muriithi

6 days	Implement creation of new platform.	Frederick Muriuki Muriithi

6 days	typing: Fix type errors	Frederick Muriuki Muriithi

6 days	Lint: Silence linter by fixing minor issues.	Frederick Muriuki Muriithi

6 days	Lint: Fix imports.	Frederick Muriuki Muriithi

6 days	Lint: Get rid of single-use variable	Frederick Muriuki Muriithi

6 days	Lint: Get rid of extraneous if check.	Frederick Muriuki Muriithi

6 days	Handle FamilyOrder when creating a population.	Frederick Muriuki Muriithi

7 days	Fix minor UI bug.	Frederick Muriuki Muriithi

7 days	Initialise "Platforms" section.	Frederick Muriuki Muriithi

7 days	Move R/qtl2 upload code under the populations package.	Frederick Muriuki Muriithi

7 days	Initialise the "Expression Data" section.	Frederick Muriuki Muriithi

7 days	UI: Indicate currently active menu.	Frederick Muriuki Muriithi

10 days	Initialise UI for managing genotype datasets.	Frederick Muriuki Muriithi

11 days	Only show a single genotype dataset.	Frederick Muriuki Muriithi
	It is expected that there is only ever a single genotype dataset for any one particular population.
11 days	UI Improvement: Get rid on "Select Species" legend	Frederick Muriuki Muriithi

11 days	List genotype datasets	Frederick Muriuki Muriithi

11 days	Fix minor UI bugs.	Frederick Muriuki Muriithi

12 days	Add genotype dataset UI	Frederick Muriuki Muriithi

12 days	Separate genetic markers from encodings and datasets	Frederick Muriuki Muriithi

12 days	Put endpoint behind auth.	Frederick Muriuki Muriithi

12 days	Document the menu on the home page.	Frederick Muriuki Muriithi

13 days	Display some genotype information.	Frederick Muriuki Muriithi

13 days	Parse ints from strings safely.	Frederick Muriuki Muriithi

13 days	Enable spefifying of start point for enumerator.	Frederick Muriuki Muriithi

13 days	Select genotype's population.	Frederick Muriuki Muriithi

13 days	Provide entry-point of genotypes.	Frederick Muriuki Muriithi

13 days	UI Improvements: Move genotypes below populations.	Frederick Muriuki Muriithi

13 days	UI Improvements: Remove duplicate "Select Species"	Frederick Muriuki Muriithi

13 days	UI Improvements: Provide better copy for the page.	Frederick Muriuki Muriithi

13 days	UI Improvements: Enumerate data in tables.	Frederick Muriuki Muriithi

13 days	UI Improvements: Species	Frederick Muriuki Muriithi
	- Remove redundant information - Rename "Scientific Name" to "Organism Name" - Add helpful tooltip text to elements - Rename "TaxonId" to "Taxonomy ID"
13 days	UI Improvements: Provide some details of logged in user	Frederick Muriuki Muriithi

13 days	UI Improvements: Move headings/titles to the left.	Frederick Muriuki Muriithi

14 days	Fix minor bugs and linting and typing errors.	Frederick Muriuki Muriithi

14 days	Use new endpoint to create resource and assign appropriate roles.	Frederick Muriuki Muriithi