gn-uploader - gn-uploader: Data uploader for GeneNetwork

Age	Commit message (Collapse)	Author
4 days	Provide URI for the POST endpoint for chunked uploads.	Frederick Muriuki Muriithi

7 days	Handle non-existent values correctly.	Frederick Muriuki Muriithi

7 days	Update the previews on changing values and/or files.	Frederick Muriuki Muriithi

7 days	Trigger 'change' event on resetting value(s) to default.	Frederick Muriuki Muriithi

7 days	Import files.js to get access to 'read_first_n_lines' function.	Frederick Muriuki Muriithi

7 days	Add function to update a preview table.	Frederick Muriuki Muriithi

7 days	Display preview UI elements.	Frederick Muriuki Muriithi

7 days	Add template for tables to preview files' parsing.	Frederick Muriuki Muriithi

7 days	Move common sidebar content	Frederick Muriuki Muriithi

8 days	Use January as default month	Frederick Muriuki Muriithi
	Sometimes, the publication date only contains the year.
8 days	Handle error conditions	Frederick Muriuki Muriithi
	* Only fetch abstract details if the summary is successful * Indicate error if fetching summary fails
11 days	Separate bundle and individual files processing	Frederick Muriuki Muriithi
	Move the code processing the R/qtl2 bundle into a separate function and call it. Create a new (currently, failing) function to process the individual files.
11 days	Refactor template to extend common base	Frederick Muriuki Muriithi
	Extend the common base template in order to reuse the common parts for uploading phenotypes.
11 days	Allow choice between the two UI options	Frederick Muriuki Muriithi
	Allow the user to switch between using the R/qtl2 file format or uploading the individual files.
11 days	Rename template	Frederick Muriuki Muriithi
	Rename original template to indicate it uses the R/qtl2 bundle format.
11 days	Add page documentation.	Frederick Muriuki Muriithi

11 days	Prompt for the files.	Frederick Muriuki Muriithi

11 days	Prompt for file structure details.	Frederick Muriuki Muriithi

12 days	Add incomple template for uploading individual files.	Frederick Muriuki Muriithi

12 days	Create new base templates for upload of phenotype.	Frederick Muriuki Muriithi
	Implement the common UI features, for fetching publication details.
12 days	Update link text.	Frederick Muriuki Muriithi

14 days	Add menu entry for platforms in "View Species" page.	Frederick Muriuki Muriithi

14 days	Retain population for "List Markers" page	Frederick Muriuki Muriithi
	For UI consistency, and as a convenience to the users, retain the population details for the "List Markers" page to help them navigate more easily using the breadcrumbs.
14 days	Reorder menus in the populations page.	Frederick Muriuki Muriithi
	Make the order of the menus a little closer to the likely order of data upload.
14 days	Deactivate access to incomplete/unimplemented features.	Frederick Muriuki Muriithi

14 days	UI: Remove extraneous text in "View*" pages.	Frederick Muriuki Muriithi

14 days	Improve breadcrumbs	Frederick Muriuki Muriithi
	Update the breadcrumb links such that each will lead back the parent section rather than to generic section pages. This is updated for the relevant parts of the UI.
2024-12-09	Prevent user from continuing on error.	Frederick Muriuki Muriithi

2024-12-09	Prevent errors' table header from scrolling away.	Frederick Muriuki Muriithi

2024-12-03	Display the files metadata in progress section.	Frederick Muriuki Muriithi

2024-12-03	UI Styling: make table body text slightly smaller.	Frederick Muriuki Muriithi

2024-12-03	UI: Clip text that is too long.	Frederick Muriuki Muriithi

2024-12-03	Improve UI: stdout/stderr output	Frederick Muriuki Muriithi
	Add styling to section and limit the height of the content.
2024-12-03	Display cell value	Frederick Muriuki Muriithi
	Display the cell value to enable the user compare the error message to the actual value, in order to figure out how to fix the error(s).
2024-12-03	Improve UI: Move if check out of table	Frederick Muriuki Muriithi
	Create a new section for the errors display, and only display the table if there is at least one error.
2024-12-03	Enable limiting of number of errors to fetch.	Frederick Muriuki Muriithi

2024-12-02	Add emphasis to important point.	Frederick Muriuki Muriithi

2024-12-02	Add UI to view status of the job as it runs.	Frederick Muriuki Muriithi

2024-10-17	UI: Create background job when user uploads file.	Frederick Muriuki Muriithi

2024-10-14	Improve UI copy: Add list of files used.	Frederick Muriuki Muriithi

2024-10-14	Improve layout and styling of sidebar content	Frederick Muriuki Muriithi

2024-10-10	UI hints: Help user in choosing the appropriate option.	Frederick Muriuki Muriithi

2024-10-10	Build UI to add new phenotypes.	Frederick Muriuki Muriithi
	Build the UI and set up styling. This is not working currently.
2024-10-10	Limit the length of the population description	Frederick Muriuki Muriithi

2024-10-07	Add phenotype units to UI	Frederick Muriuki Muriithi

2024-10-07	Create new phenotype dataset (PublishFreeze).	Frederick Muriuki Muriithi
	Provide the UI and code to create a new phenotype dataset.
2024-10-07	Generalise pagination and paginate phenotypes	Frederick Muriuki Muriithi
	Generalise the code generating table pagination UI, and use it to paginate the list of phenotypes.
2024-10-01	Add UI elements for possible extra functionality.	Frederick Muriuki Muriithi

2024-10-01	Extract privileges and use them for access control	Frederick Muriuki Muriithi

2024-09-30	Initialise views for a specific phenotype	Frederick Muriuki Muriithi
	Each phenotype is independent, of all others, and they are only put into datasets mostly for easy coralling of phenotypes related to a specific populations. As such, the system will probably need to provide a way to view (and possibly edit) each phenotype independent of all the others. This also fits in with the auth.