| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2024-02-15 | Filter out NULL values | Frederick Muriuki Muriithi | |
| 2024-02-05 | Fix linting and type errors. | Frederick Muriuki Muriithi | |
| 2024-01-23 | Update scripts to use redis prefix. | Frederick Muriuki Muriithi | |
| 2024-01-22 | scripts: Pass in logger to get detailed updates. | Frederick Muriuki Muriithi | |
| 2024-01-19 | scripts: Process R/qtl2 bundle | Frederick Muriuki Muriithi | |
| Build script to start the processing of the R/qtl2 bundle. | |||
| 2024-01-16 | Filter out items with values of `None`. | Frederick Muriuki Muriithi | |
| The ProbeSetData table does not allow `NULL` for the `value` column for good reason - if there is no value, just don't have a record for that particular sample. | |||
| 2024-01-15 | Update imports: `take` was moved to different package. | Frederick Muriuki Muriithi | |
| 2024-01-15 | Process the `pheno` files. | Frederick Muriuki Muriithi | |
| Process the data in the pheno files and insert it into the database. | |||
| 2024-01-15 | Initialise `install_phenos` script. | Frederick Muriuki Muriithi | |
| 2024-01-15 | Extract common structure into separate modules. | Frederick Muriuki Muriithi | |
| 2024-01-11 | Update pmap data in the database. | Frederick Muriuki Muriithi | |
| 2024-01-11 | Update gmap data in the database | Frederick Muriuki Muriithi | |
| Update the genetic positions (in centiMorgans) in the database. | |||
| 2024-01-11 | Cleanup linting and typing errors. | Frederick Muriuki Muriithi | |
| 2024-01-11 | CLI: Require datasetid as an argument. | Frederick Muriuki Muriithi | |
| 2024-01-10 | Provide convenience functions to avoid subtle call errors | Frederick Muriuki Muriithi | |
| 2024-01-10 | Cross-reference genotype data to the dataset. | Frederick Muriuki Muriithi | |
| 2024-01-10 | Insert genotype data. | Frederick Muriuki Muriithi | |
| 2024-01-10 | Cross-reference individuals to populations. | Frederick Muriuki Muriithi | |
| 2024-01-10 | Insert any new individuals/samples into the database. | Frederick Muriuki Muriithi | |
| 2024-01-10 | Insert any new markers | Frederick Muriuki Muriithi | |
| Insert any new markers found into the database. | |||
| 2024-01-09 | WIP: Install genotypes from R/qtl2 bundle | Frederick Muriuki Muriithi | |
| Load the genotype information from the R/qtl2 bundle and insert it into the database. | |||
 |
index : gn-uploader | |
| gn-uploader: Data uploader for GeneNetwork |
| aboutsummaryrefslogtreecommitdiff |