aboutsummaryrefslogtreecommitdiff
path: root/scripts/rqtl2/install_phenos.py
AgeCommit message (Collapse)Author
2024-02-05Fix linting and type errors.Frederick Muriuki Muriithi
2024-01-22scripts: Pass in logger to get detailed updates.Frederick Muriuki Muriithi
2024-01-19scripts: Process R/qtl2 bundleFrederick Muriuki Muriithi
Build script to start the processing of the R/qtl2 bundle.
2024-01-16Filter out items with values of `None`.Frederick Muriuki Muriithi
The ProbeSetData table does not allow `NULL` for the `value` column for good reason - if there is no value, just don't have a record for that particular sample.
2024-01-15Update imports: `take` was moved to different package.Frederick Muriuki Muriithi
2024-01-15Process the `pheno` files.Frederick Muriuki Muriithi
Process the data in the pheno files and insert it into the database.
2024-01-15Initialise `install_phenos` script.Frederick Muriuki Muriithi