| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2024-11-22 | Use gn-libs code for db connection. | Frederick Muriuki Muriithi | |
| Use the code in gn-libs to connect to the database, rather than a local module. | |||
| 2024-08-12 | Rename module: Module contains exceptions classes. | Frederick Muriuki Muriithi | |
| 2024-07-25 | Fix typing and linting errors. | Frederick Muriuki Muriithi | |
| 2024-07-25 | Rename module: qc_app --> uploader | Frederick Muriuki Muriithi | |
| 2024-07-01 | Check for genotype samples in the database | Frederick Muriuki Muriithi | |
| Check for genotype samples in both the R/qtl2 file and in the database. | |||
| 2024-04-08 | Fix pylint and mypy errors. | Frederick Muriuki Muriithi | |
| 2024-04-04 | Remove unused database connection. | Frederick Muriuki Muriithi | |
| 2024-02-21 | Check that samples/cases are consistent | Frederick Muriuki Muriithi | |
| Ensure that **ALL** samples/cases/individuals mentioned in any of the pheno files actually exist in at least one of the geno files. | |||
| 2024-02-21 | Pass 'filename' value to error checker function. | Frederick Muriuki Muriithi | |
| 2024-02-20 | Track filename in the errors | Frederick Muriuki Muriithi | |
| R/qtl2 bundles can contain more than one file, of the same type. When errors are encountered in any of the files, we need to be able to inform the user which file it is, in addition to the line and column number. | |||
| 2024-02-15 | Only log out information if the check is actually run. | Frederick Muriuki Muriithi | |
| 2024-02-13 | Add some parallelism to the QC Checks | Frederick Muriuki Muriithi | |
| 2024-02-13 | Provide nice UI progress indicators. | Frederick Muriuki Muriithi | |
| 2024-02-12 | Check for errors in the 'phenose' file. | Frederick Muriuki Muriithi | |
| 2024-02-12 | Check for errors in the 'pheno' file. | Frederick Muriuki Muriithi | |
| 2024-02-12 | Collect and display errors on 'geno' files in the bundle. | Frederick Muriuki Muriithi | |
| 2024-02-12 | Add scaffolding for running individual files' QC checks | Frederick Muriuki Muriithi | |
| 2024-02-12 | Extract missing files check to external function | Frederick Muriuki Muriithi | |
| 2024-02-12 | Retrive and display generic bundle errors | Frederick Muriuki Muriithi | |
| Implement the first QC check for generic errors e.g. missing files in bundle, etc. Display retrieved errors on UI. | |||
| 2024-02-12 | R/qtl2 QC: Set up scaffolding for QC UI | Frederick Muriuki Muriithi | |
| Set up the scaffolding for the flows and UI that will be used when running QC against the uploaded R/qtl2 bundle. This will be fleshed out later, and the UI is likely to change somewhat, down the line. | |||
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index : gn-uploader | |
| gn-uploader: Data uploader for GeneNetwork |
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