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gn-uploader: Data uploader for GeneNetwork
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2024-04-12
Provide more relevant error message.
Frederick Muriuki Muriithi
2024-04-12
Provide defaults for required field.
Frederick Muriuki Muriithi
2024-04-12
Add missing return.
Frederick Muriuki Muriithi
2024-04-12
Consistently check for possibly non-existent data
Frederick Muriuki Muriithi
2024-04-12
Provide tissue-id details to probeset dataset templates
Frederick Muriuki Muriithi
2024-04-10
linting: Fix linting errors.
Frederick Muriuki Muriithi
2024-04-10
logging: Set up logging in wsgi.py
Frederick Muriuki Muriithi
2024-04-10
Gracefully handle all `werkzeug.exceptions` errors.
Frederick Muriuki Muriithi
2024-04-10
Use application logger, not root logger.
Frederick Muriuki Muriithi
2024-04-08
Add logging for IntegrityError
Frederick Muriuki Muriithi
2024-04-08
Refactor: Make error-checking more robust
Frederick Muriuki Muriithi
2024-04-08
Fix issues caught by integration tests.
Frederick Muriuki Muriithi
2024-04-08
Fix pylint and mypy errors.
Frederick Muriuki Muriithi
2024-04-08
bug: UI: Provide better error messaging.
Frederick Muriuki Muriithi
2024-04-08
bug: Handle IntegrityError: Studies cannot have same name.
Frederick Muriuki Muriithi
2024-04-08
bug: Check that Genotype dataset name is not duplicated.
Frederick Muriuki Muriithi
2024-04-05
Handle exceptions creating ProbeSet datasets.
Frederick Muriuki Muriithi
2024-04-05
Add explicit route for favicon to reduce noise in the logs.
Frederick Muriuki Muriithi
2024-03-29
Add UI to select/create tissue.
Frederick Muriuki Muriithi
2024-03-20
Use `url_for` to get icon.
Frederick Muriuki Muriithi
2024-03-19
Set up application logging.
Frederick Muriuki Muriithi
2024-03-19
Add debugging statements to track upload of R/qtl2 bundle.
Frederick Muriuki Muriithi
2024-03-19
Query by `Id` rather than `ProbeFreezeId`
Frederick Muriuki Muriithi
2024-03-15
Move defaults settings into qc_app module.
Frederick Muriuki Muriithi
2024-03-12
Build up correct path to default settings
Frederick Muriuki Muriithi
2024-03-04
Use `Id` rather than `ProbeFreezeId`.
Frederick Muriuki Muriithi
2024-03-04
Display flash messages correctly.
Frederick Muriuki Muriithi
2024-02-28
Remove last vestiges of flask's "instance path" configurations.
Frederick Muriuki Muriithi
2024-02-27
Remove use of instance path in configurations.
Frederick Muriuki Muriithi
2024-02-15
Refactor checking for user input errors.
Frederick Muriuki Muriithi
2024-02-15
Verify that the file actually exist
Frederick Muriuki Muriithi
2024-02-15
Provide only the file name, not full path.
Frederick Muriuki Muriithi
2024-02-15
Provide the log messages to the status page.
Frederick Muriuki Muriithi
2024-02-14
Provide endpoint to send data to.
Frederick Muriuki Muriithi
2024-02-14
Extract upload progress indication code
Frederick Muriuki Muriithi
2024-02-13
Provide nice UI progress indicators.
Frederick Muriuki Muriithi
2024-02-12
Check for errors in the 'phenose' file.
Frederick Muriuki Muriithi
2024-02-12
Check for errors in the 'pheno' file.
Frederick Muriuki Muriithi
2024-02-12
Improve error display for generic errors
Frederick Muriuki Muriithi
2024-02-12
Collect and display errors on 'geno' files in the bundle.
Frederick Muriuki Muriithi
2024-02-12
UI: Provide QC successful results page
Frederick Muriuki Muriithi
2024-02-12
Retrive and display generic bundle errors
Frederick Muriuki Muriithi
2024-02-12
Raise error if file is missing rather than returning a Union value.
Frederick Muriuki Muriithi
2024-02-12
R/qtl2 QC: Set up scaffolding for QC UI
Frederick Muriuki Muriithi
2024-02-07
ShortName is optional, remove check and set default
Frederick Muriuki Muriithi
2024-02-07
Prevent infinite redirect.
Frederick Muriuki Muriithi
2024-02-07
Fix error display: setup correct error class
Frederick Muriuki Muriithi
2024-02-07
Set up limits for inputs in UI
Frederick Muriuki Muriithi
2024-02-06
Bug: Fix routing issues
Frederick Muriuki Muriithi
2024-02-05
Run QC on the 'geno' file in R/qtl2 bundle.
Frederick Muriuki Muriithi
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