| Age | Commit message (Expand) | Author |
|---|
| 2024-01-22 | UI: Fix some UI bugs. | Frederick Muriuki Muriithi |
| 2024-01-22 | scripts: Pass in logger to get detailed updates. | Frederick Muriuki Muriithi |
| 2024-01-22 | UI: Show progress of R/qtl2 bundle processing. | Frederick Muriuki Muriithi |
| 2024-01-20 | Fetch sample/case names from database...Fetch the sample/case names from the database rather than from a
static file in the repository.
Issue:
https://issues.genenetwork.org/issues/quality-control/read-samples-from-database-by-species
| Frederick Muriuki Muriithi |
| 2024-01-19 | UI: Present entry point for R/qtl2 bundles upload. | Frederick Muriuki Muriithi |
| 2024-01-18 | UI: Display summary information. | Frederick Muriuki Muriithi |
| 2024-01-18 | UI: Create new ProbeSet dataset. | Frederick Muriuki Muriithi |
| 2024-01-18 | UI: Select from existing ProbeSet datasets. | Frederick Muriuki Muriithi |
| 2024-01-18 | Create new ProbeSet study. | Frederick Muriuki Muriithi |
| 2024-01-17 | UI: Select ProbeSet study. | Frederick Muriuki Muriithi |
| 2024-01-17 | UI: Implement creating new genotype datasets. | Frederick Muriuki Muriithi |
| 2024-01-17 | UI: Initialise summary page. | Frederick Muriuki Muriithi |
| 2024-01-17 | Enable selecting from existing genotype datasets. | Frederick Muriuki Muriithi |
| 2024-01-16 | UI: Create UI for creating a new Genotype dataset. | Frederick Muriuki Muriithi |
| 2024-01-16 | UI: Create UI to select from existing genotype datasets. | Frederick Muriuki Muriithi |
| 2024-01-16 | Create intermediate step...We do not have the option to modify the request and then redirect with
the modification in place. To go around that, this commit creates an
intermediate step that informs the user of their progress, while
allowing us to store the filename for future steps.
| Frederick Muriuki Muriithi |
| 2024-01-08 | Upload R/qtl2 zip bundle and check for errors. | Frederick Muriuki Muriithi |
| 2024-01-08 | Implement "POST" path for "select-population" route. | Frederick Muriuki Muriithi |
| 2024-01-05 | UI to select the population under which the data falls. | Frederick Muriuki Muriithi |
| 2024-01-05 | Initialise R/qtl2 bundle upload path...Initialise the upload path for R/qtl2 bundles. This commit adds UI
that allows the user to select from existing species, before
proceeding to the next stage.
| Frederick Muriuki Muriithi |
| 2023-12-20 | Add favicon...Add a favicon to reduce noise in the logs due to failed requests.
| Frederick Muriuki Muriithi |
| 2023-12-19 | Commit missing templates. | Frederick Muriuki Muriithi |
| 2023-12-07 | Samples: Read an save data to db. | Frederick Muriuki Muriithi |
| 2023-12-07 | Samples: Provide preview feature. | Frederick Muriuki Muriithi |
| 2023-12-06 | Feature: Upload Samples/Cases...Implements the code enabling the upload of the samples/cases to the database.
| Frederick Muriuki Muriithi |
| 2023-11-30 | Remove link to non-existent file. | Frederick Muriuki Muriithi |
| 2023-11-30 | Handle duplicate dataset creation error...Notify the user when they try to create a new dataset that has the
same name as an existing dataset and give them the chance to fix it
before continuing.
| Frederick Muriuki Muriithi |
| 2023-11-28 | Capture, log and handle generic exceptions...Handle any and all unforeseen error conditions gracefully by capturing
the exceptions, logging out for debug purposes and providing the user
with a generic error page.
| Frederick Muriuki Muriithi |
| 2023-11-15 | UI: Remove 'Full Name' and 'Short Name' fields for study. | Frederick Muriuki Muriithi |
| 2023-11-15 | UI: Only show GeneChipId and GeneChipName | Frederick Muriuki Muriithi |
| 2023-10-16 | Indicate progress for data insert. | Frederick Muriuki Muriithi |
| 2023-01-17 | Add link back to index page on abort or errors | Frederick Muriuki Muriithi |
| 2023-01-17 | upload: Enable cancelling an upload. | Frederick Muriuki Muriithi |
| 2022-12-23 | Help: Provide some help content for end user | Frederick Muriuki Muriithi |
| 2022-11-16 | ui: provide error messaging if file is not selected. | Frederick Muriuki Muriithi |
| 2022-11-16 | ui: Only display the "alert-success" green on completion...* To avoid confusion, only display the "alert-success" green on
completion of the parsing process. While parsing, if there are no
errors, then display the "No errors found so far" message without
the green colour.
| Frederick Muriuki Muriithi |
| 2022-11-12 | Accept plain text (text/plain) files | Frederick Muriuki Muriithi |
| 2022-08-31 | Commit missing files. | Frederick Muriuki Muriithi |
| 2022-08-05 | Update job status. Display stdout and stderr outputs...* Display the status of the job, as it is running
* Display STDERR output if an error occurs
* Display STDOUT output as job is running and on successful completion
of the job
| Frederick Muriuki Muriithi |
| 2022-08-04 | Implement data insertion...- Hook up external data insertion script to webserver code
- Provide rudimentary status indication
- Generalise some job creation details
| Frederick Muriuki Muriithi |
| 2022-08-04 | UX: Enable selecting radio by clicking anywhere on the row...Ease the selection of a radio button by allowing the user to click on
any of the table cells that are in the same row as the radio button of
concern.
| Frederick Muriuki Muriithi |
| 2022-07-19 | Implement confirmation stage...Provide user with a confirmation stage where they can verify all the
data before inserting into the database.
| Frederick Muriuki Muriithi |
| 2022-07-19 | Enable creation of new dataset...Enable the user to create a new dataset should the need arise.
A few extra fixes were done, such as:
- Provide list of average methods to choose from
- Provide input elements for some expected fields
- Add a new confirmation step before doing the actual data update
| Frederick Muriuki Muriithi |
| 2022-07-19 | Replace redirect with user confirmation...Rather than using the redirect, that led to exposing the study id as a
get parameter, this commit adds an auxilliary step that allows the
user to choose whether to continue with the new study or go back and
select an existing study.
| Frederick Muriuki Muriithi |
| 2022-07-19 | Implement dataset selection...- Implement UI enabling selection from existing datasets
- Start implementation of UI that enables creation of new dataset
| Frederick Muriuki Muriithi |
| 2022-07-19 | Fix macro | Frederick Muriuki Muriithi |
| 2022-07-19 | Add 'group' and 'tissue' selection....- Build code to populate the "Group" and "Tissue" dropdown lists
- Enable redirect with POST data (code 307) in case there is input
error to enable the user fix their errors
- Move hidden fields to macro to reduce repetition
| Frederick Muriuki Muriithi |
| 2022-07-19 | Implement select study...Implement the select study UI
| Frederick Muriuki Muriithi |
| 2022-07-19 | Select the platform (GeneChipId) first | Frederick Muriuki Muriithi |
| 2022-07-07 | Rework styling for form elements | Frederick Muriuki Muriithi |
