| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2024-07-25 | Rename module: qc_app --> uploader | Frederick Muriuki Muriithi | |
| 2024-06-12 | Update documentation | Frederick Muriuki Muriithi | |
| 2024-03-21 | Improve channel definition documentation. | Frederick Muriuki Muriithi | |
| 2024-02-28 | tests: test with just the message - don't include markup | Frederick Muriuki Muriithi | |
| Markup can, and will change as improvements are made, but the error messages will not change that often, plus that is what we want to actually test for, not the markup. | |||
| 2024-02-28 | tests: Update unit tests: remove use of obsoleted functions. | Frederick Muriuki Muriithi | |
| 2024-02-16 | Documentation: Add section on configurations. | Frederick Muriuki Muriithi | |
| 2024-01-23 | Tests: Use prefixes in tests rather than starting redis server | Frederick Muriuki Muriithi | |
| It's easier, and more robust to put the data under a prefix within a redis database rather than try to run a redis server, especially within the test environment. This commit updates the tests to use a redis prefix instead. | |||
| 2024-01-08 | Add channel authorization. | Frederick Muriuki Muriithi | |
| 2024-01-03 | Refactor: Extract potentially reusable functions | Frederick Muriuki Muriithi | |
| The processing of transposed files is probably going to be very similar, thus the need to extract some reusable code from the geno-file-specific function in preparation. | |||
| 2024-01-02 | Cleanup: Fix linting and typing errors and update docs. | Frederick Muriuki Muriithi | |
| 2022-11-16 | ui: Only display the "alert-success" green on completion | Frederick Muriuki Muriithi | |
| * To avoid confusion, only display the "alert-success" green on completion of the parsing process. While parsing, if there are no errors, then display the "No errors found so far" message without the green colour. | |||
| 2022-07-07 | Rework guix.scm to use latest commit | Frederick Muriuki Muriithi | |
| Rather than specifying a specific commit in the development guix.scm this commit has the system automatically get the latest commit and use that for building the package object. | |||
| 2022-06-15 | Fix linting and type errors | Frederick Muriuki Muriithi | |
| 2022-05-27 | Update documentation | Frederick Muriuki Muriithi | |
| 2022-05-27 | Revert "Accept exponential notation for standard-error files" | Frederick Muriuki Muriithi | |
| This reverts commit 960c1a5b831d8761a3e1716f86ded4cc5b67eea0. After meeting with Arthur, it was confirmed that the CSV file should not have values in the exponential notation. | |||
| 2022-05-20 | Accept exponential notation for standard-error files | Frederick Muriuki Muriithi | |
| 2022-05-19 | Update Web-UI: use new error collection paradigm | Frederick Muriuki Muriithi | |
| - README.org: document how to run scripts manually - manifest.scm: remove python-rq as a dependency - qc_app/jobs.py: rework job launching and processing - qc_app/parse.py: use reworked job processing - qc_app/templates/job_progress.html: display progress correctly - qc_app/templates/parse_results.html: display final results - scripts/worker.py: new worker script | |||
| 2022-05-11 | Document generating and running qc for/with docker | Frederick Muriuki Muriithi | |
| 2022-05-09 | Update documentation and license | Frederick Muriuki Muriithi | |
| Add documentation on how to run the development version of the GeneNetwork Quality Control application. Update the license to the agpl3+ license used by genenetwork3 | |||
| 2022-04-27 | Enable managing app via setup.py | Frederick Muriuki Muriithi | |
| While the application is developed with GNU Guix, the end user might not be using it, and therefore, this commit provides a way for the user to install the application with the usual python package management systems. | |||
| 2022-04-27 | Implement command-line interface for QC of files | Frederick Muriuki Muriithi | |
| 2022-04-25 | docs: update documentation on checks | Frederick Muriuki Muriithi | |
| 2022-04-11 | Set up initial, failing tests for cell values | Frederick Muriuki Muriithi | |
| 2022-04-11 | Initialise the QC repository | Frederick Muriuki Muriithi | |
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index : gn-uploader | |
| gn-uploader: Data uploader for GeneNetwork |
| aboutsummaryrefslogtreecommitdiff |
path: root/README.org