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It's easier, and more robust to put the data under a prefix within a
redis database rather than try to run a redis server, especially
within the test environment. This commit updates the tests to use a
redis prefix instead.
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The processing of transposed files is probably going to be very
similar, thus the need to extract some reusable code from the
geno-file-specific function in preparation.
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* To avoid confusion, only display the "alert-success" green on
completion of the parsing process. While parsing, if there are no
errors, then display the "No errors found so far" message without
the green colour.
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Rather than specifying a specific commit in the development guix.scm
this commit has the system automatically get the latest commit and use
that for building the package object.
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This reverts commit 960c1a5b831d8761a3e1716f86ded4cc5b67eea0.
After meeting with Arthur, it was confirmed that the CSV file should
not have values in the exponential notation.
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- README.org: document how to run scripts manually
- manifest.scm: remove python-rq as a dependency
- qc_app/jobs.py: rework job launching and processing
- qc_app/parse.py: use reworked job processing
- qc_app/templates/job_progress.html: display progress correctly
- qc_app/templates/parse_results.html: display final results
- scripts/worker.py: new worker script
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Add documentation on how to run the development version of the
GeneNetwork Quality Control application.
Update the license to the agpl3+ license used by genenetwork3
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While the application is developed with GNU Guix, the end user might
not be using it, and therefore, this commit provides a way for the
user to install the application with the usual python package
management systems.
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