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-rw-r--r--tests/qc/test_parsing.py9
1 files changed, 7 insertions, 2 deletions
diff --git a/tests/qc/test_parsing.py b/tests/qc/test_parsing.py
index be13d9b..6c784d5 100644
--- a/tests/qc/test_parsing.py
+++ b/tests/qc/test_parsing.py
@@ -1,3 +1,4 @@
+"""Test the parsing of the files"""
import pytest
from quality_control.errors import ParseError
@@ -14,8 +15,9 @@ from quality_control.parsing import FileType, parse_file
("tests/test_data/duplicated_headers_no_data_errors.tsv",
FileType.STANDARD_ERROR),))
def test_parse_file_fails_with_wrong_filetype_declaration(filepath, filetype, strains):
+ """Check that parsing fails if the wrong file type is declared"""
with pytest.raises(ParseError):
- for line in parse_file(filepath, filetype, strains):
+ for line in parse_file(filepath, filetype, strains): # pylint: disable=[unused-variable]
pass
@pytest.mark.parametrize(
@@ -24,6 +26,7 @@ def test_parse_file_fails_with_wrong_filetype_declaration(filepath, filetype, st
("tests/test_data/average.tsv", FileType.AVERAGE),
("tests/test_data/standarderror.tsv", FileType.STANDARD_ERROR)))
def test_parse_file_passes_with_valid_files(filepath, filetype, strains):
+ """Check that parsing succeeds with valid files"""
for line in parse_file(filepath, filetype, strains):
assert bool(line)
@@ -33,6 +36,7 @@ def test_parse_file_passes_with_valid_files(filepath, filetype, strains):
("tests/test_data/average.tsv", FileType.AVERAGE),
("tests/test_data/standarderror.tsv", FileType.STANDARD_ERROR)))
def test_parse_file_works_with_large_files(filepath, filetype, strains):
+ """Check that parsing succeeds even with large files."""
for line in parse_file(filepath, filetype, strains):
assert bool(line)
@@ -43,6 +47,7 @@ def test_parse_file_works_with_large_files(filepath, filetype, strains):
("tests/test_data/standarderror_1_error_at_end.tsv", FileType.STANDARD_ERROR),
("tests/test_data/duplicated_headers_no_data_errors.tsv", FileType.AVERAGE)))
def test_parse_file_raises_exception_on_error_in_file(filepath, filetype, strains):
+ "Check that parsing fails if any error is found in a file"
with pytest.raises(ParseError):
- for line in parse_file(filepath, filetype, strains):
+ for line in parse_file(filepath, filetype, strains): # pylint: disable=[unused-variable]
pass