diff options
Diffstat (limited to '.guix/modules')
| -rw-r--r-- | .guix/modules/gnqc-py.scm | 57 |
1 files changed, 57 insertions, 0 deletions
diff --git a/.guix/modules/gnqc-py.scm b/.guix/modules/gnqc-py.scm new file mode 100644 index 0000000..4ff86b5 --- /dev/null +++ b/.guix/modules/gnqc-py.scm @@ -0,0 +1,57 @@ +(define-module (gnqc-py) + #:use-module (guix) + #:use-module (guix gexp) + #:use-module (guix packages) + #:use-module (guix git-download) + #:use-module ((guix licenses) #:prefix license:) + + #:use-module (gnu packages check) + #:use-module (gnu packages databases) + #:use-module (gnu packages python-xyz) + #:use-module (gnu packages python-web) + #:use-module (guix build-system python) + #:use-module (gnu packages python-check)) + +(define %source-dir (dirname (dirname (current-source-directory)))) + +(define vcs-file? + (or (git-predicate %source-dir) + (const #t))) + +(define gnqc-py + (package + (name "gnqc-py") + (version "0.0.1") + (source (local-file "../.." + "gnqc-py-checkout" + #:recursive? #t + #:select? vcs-file?)) + (build-system python-build-system) + (arguments + (list + #:phases + #~(modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (invoke "pytest" "-k" "unit_test"))))))) + (native-inputs + (list python-mypy + python-pylint + python-pytest + python-hypothesis)) + (propagated-inputs + (list gunicorn + python-redis + python-flask + python-pyyaml + python-jsonpickle + python-mysqlclient)) + (synopsis "GeneNetwork Quality Control Application") + (description + "GeneNetwork qc is a quality control application for the data files that + eventually are used to add to the data in the GeneNetwork project.") + (home-page "https://gitlab.com/fredmanglis/gnqc_py") + (license license:agpl3+))) + +gnqc-py |