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authorFrederick Muriuki Muriithi2022-04-13 10:09:02 +0300
committerFrederick Muriuki Muriithi2022-04-13 10:09:02 +0300
commitbb8a92b36f85f6f3b2c6cd9ed6bbebd03ecf127c (patch)
tree2a0f89e8c8f431fff9674ec6c730bdbdcfe9c430 /tests/qc
parent0cc8fd5fb2a026662dc2bd12f6bad9f68e5da5b0 (diff)
downloadgn-uploader-bb8a92b36f85f6f3b2c6cd9ed6bbebd03ecf127c.tar.gz
Add tests outline for file parsing
Add dummy failing tests and a stub for the parsing of the files
Diffstat (limited to 'tests/qc')
-rw-r--r--tests/qc/test_parsing.py43
1 files changed, 43 insertions, 0 deletions
diff --git a/tests/qc/test_parsing.py b/tests/qc/test_parsing.py
new file mode 100644
index 0000000..5fe5a3d
--- /dev/null
+++ b/tests/qc/test_parsing.py
@@ -0,0 +1,43 @@
+import pytest
+
+from quality_control.parsing import FileType, parse_file
+
+
+@pytest.mark.parametrize(
+ "filepath,filetype",
+ (("tests/test_data/average_crlf.tsv", FileType.STANDARD_ERROR),
+ ("tests/test_data/average_error_at_end_200MB.tsv",
+ FileType.STANDARD_ERROR),
+ ("tests/test_data/average.tsv", FileType.STANDARD_ERROR),
+ ("tests/test_data/standarderror_1_error_at_end.tsv", FileType.AVERAGE),
+ ("tests/test_data/standarderror.tsv", FileType.AVERAGE),
+ ("tests/test_data/we_found_no_errors_in_your_file.tsv",
+ FileType.STANDARD_ERROR),))
+def test_parse_file_fails_with_wrong_filetype_declaration(filepath, filetype):
+ assert False, "Not Implemented"
+
+@pytest.mark.parametrize(
+ "filepath,filetype",
+ (("tests/test_data/average_crlf.tsv", FileType.AVERAGE),
+ ("tests/test_data/average.tsv", FileType.AVERAGE),
+ ("tests/test_data/standarderror.tsv", FileType.STANDARD_ERROR),
+ ("tests/test_data/we_found_no_errors_in_your_file.tsv", FileType.AVERAGE)))
+def test_parse_file_passes_with_valid_files(filepath, filetype):
+ assert False, "Not Implemented"
+
+@pytest.mark.parametrize(
+ "filepath,filetype",
+ (("tests/test_data/average_large.tsv", FileType.AVERAGE),
+ ("tests/test_data/average.tsv", FileType.AVERAGE),
+ ("tests/test_data/standarderror.tsv", FileType.STANDARD_ERROR),
+ ("tests/test_data/we_found_no_errors_in_your_file.tsv", FileType.AVERAGE)))
+def test_parse_file_works_with_large_files(filepath, filetype):
+ assert False, "Not Implemented"
+
+
+@pytest.mark.parametrize(
+ "filepath,filetype",
+ (("tests/test_data/average_error_at_end_200MB.tsv", FileType.AVERAGE),
+ ("tests/test_data/standarderror_1_error_at_end.tsv", FileType.STANDARD_ERROR)))
+def test_parse_file_raises_exception_on_error_in_file(filepath, filetype):
+ assert False, "Not Implemented"