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| author | Frederick Muriuki Muriithi | 2024-02-13 04:03:02 +0300 |
|---|---|---|
| committer | Frederick Muriuki Muriithi | 2024-02-13 04:03:02 +0300 |
| commit | 8b637a760362d08fb92152288d0b04f90299da5f (patch) | |
| tree | 55b9900a72f51902cd5c6150cdab3f0cd097c372 /r_qtl/r_qtl2.py | |
| parent | 092ae35512b3ef236622c4ab9dfe2bafb221ded7 (diff) | |
| download | gn-uploader-8b637a760362d08fb92152288d0b04f90299da5f.tar.gz | |
Make "FILE_TYPES" part of public interface for module/package.
Diffstat (limited to 'r_qtl/r_qtl2.py')
| -rw-r--r-- | r_qtl/r_qtl2.py | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/r_qtl/r_qtl2.py b/r_qtl/r_qtl2.py index e74312f..0241458 100644 --- a/r_qtl/r_qtl2.py +++ b/r_qtl/r_qtl2.py @@ -12,7 +12,7 @@ from functional_tools import take, chain from r_qtl.errors import InvalidFormat, MissingFileError -__FILE_TYPES__ = ( +FILE_TYPES = ( "geno", "founder_geno", "pheno", "covar", "phenocovar", "gmap", "pmap", "phenose") @@ -33,7 +33,7 @@ def control_data(zfile: ZipFile) -> dict: "comment.char": "#", "sep": ",", **{ - f"{key}_transposed": False for key in __FILE_TYPES__ + f"{key}_transposed": False for key in FILE_TYPES }, **(json.loads(zfile.read(files[0])) if files[0].endswith(".json") |