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authorFrederick Muriuki Muriithi2022-06-15 09:36:18 +0300
committerFrederick Muriuki Muriithi2022-06-15 09:36:18 +0300
commitd2605cb72d7cdbc7d3cc633b94a451c0acd2edbb (patch)
tree8bf992967a750bf4dc71290b78285f6239823816 /quality_control/standard_error.py
parent6760d322637a3d875242a66e9c1a784866d7df1d (diff)
downloadgn-uploader-d2605cb72d7cdbc7d3cc633b94a451c0acd2edbb.tar.gz
Fix linting and type errors
Diffstat (limited to 'quality_control/standard_error.py')
-rw-r--r--quality_control/standard_error.py15
1 files changed, 6 insertions, 9 deletions
diff --git a/quality_control/standard_error.py b/quality_control/standard_error.py
index aa7df3c..7e059ad 100644
--- a/quality_control/standard_error.py
+++ b/quality_control/standard_error.py
@@ -1,7 +1,7 @@
"""Contain logic for checking standard error files"""
-import re
from typing import Union
+from .utils import cell_error
from .errors import InvalidValue
def invalid_value(
@@ -12,12 +12,9 @@ def invalid_value(
`val` is not a valid input for standard error files, otherwise, it returns
`None`.
"""
- if re.search(r"^[0-9]+\.[0-9]{6,}$", val):
- return None
- if re.search(r"^0\.0+$", val) or re.search("^0+$", val):
- return None
- return InvalidValue(
- line_number, column_number, val, (
+ return cell_error(
+ r"^[0-9]+\.[0-9]{6,}$", val, line=line_number, column=column_number,
+ value=val, message=(
f"Invalid value '{val}'. "
- "Expected string representing a number with at least six decimal "
- "places."))
+ "Expected string representing a number with at least six "
+ "decimal places."))