aboutsummaryrefslogtreecommitdiff
path: root/qc_app/upload
diff options
context:
space:
mode:
authorFrederick Muriuki Muriithi2024-02-12 10:44:35 +0300
committerFrederick Muriuki Muriithi2024-02-12 18:17:41 +0300
commitabb55d7e03bf207ebf00b4c71f1bbdd8f58a0ad3 (patch)
tree65d97370d93b7ef19c271ef51f97d6d94b18a695 /qc_app/upload
parent523bd6634539a2e646a7cd4215ad3ee7dbbeeb66 (diff)
downloadgn-uploader-abb55d7e03bf207ebf00b4c71f1bbdd8f58a0ad3.tar.gz
Check for errors in the 'phenose' file.
Diffstat (limited to 'qc_app/upload')
-rw-r--r--qc_app/upload/rqtl2.py2
1 files changed, 2 insertions, 0 deletions
diff --git a/qc_app/upload/rqtl2.py b/qc_app/upload/rqtl2.py
index c45952c..66b219d 100644
--- a/qc_app/upload/rqtl2.py
+++ b/qc_app/upload/rqtl2.py
@@ -211,6 +211,8 @@ def rqtl2_bundle_qc_status(jobid: UUID):
thejob.get("errors-geno", "[]")),
errorspheno=json.loads(
thejob.get("errors-pheno", "[]")),
+ errorsphenose=json.loads(
+ thejob.get("errors-phenose", "[]")),
errorsphenocovar=json.loads(
thejob.get("errors-phenocovar", "[]")),
messages=logmessages)