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| author | Frederick Muriuki Muriithi | 2024-02-12 10:44:35 +0300 |
|---|---|---|
| committer | Frederick Muriuki Muriithi | 2024-02-12 18:17:41 +0300 |
| commit | abb55d7e03bf207ebf00b4c71f1bbdd8f58a0ad3 (patch) | |
| tree | 65d97370d93b7ef19c271ef51f97d6d94b18a695 /qc_app/upload/rqtl2.py | |
| parent | 523bd6634539a2e646a7cd4215ad3ee7dbbeeb66 (diff) | |
| download | gn-uploader-abb55d7e03bf207ebf00b4c71f1bbdd8f58a0ad3.tar.gz | |
Check for errors in the 'phenose' file.
Diffstat (limited to 'qc_app/upload/rqtl2.py')
| -rw-r--r-- | qc_app/upload/rqtl2.py | 2 |
1 files changed, 2 insertions, 0 deletions
diff --git a/qc_app/upload/rqtl2.py b/qc_app/upload/rqtl2.py index c45952c..66b219d 100644 --- a/qc_app/upload/rqtl2.py +++ b/qc_app/upload/rqtl2.py @@ -211,6 +211,8 @@ def rqtl2_bundle_qc_status(jobid: UUID): thejob.get("errors-geno", "[]")), errorspheno=json.loads( thejob.get("errors-pheno", "[]")), + errorsphenose=json.loads( + thejob.get("errors-phenose", "[]")), errorsphenocovar=json.loads( thejob.get("errors-phenocovar", "[]")), messages=logmessages) |