Feature: Upload Samples/Cases

Implements the code enabling the upload of the samples/cases to the database.

1 files changed, 5 insertions, 3 deletions

diff --git a/qc_app/entry.py b/qc_app/entry.py
index abea5ed..bf78037 100644
--- a/qc_app/entry.py
+++ b/qc_app/entry.py
@@ -14,6 +14,8 @@ from flask import (
     render_template,
     current_app as app)
 
+from .dbinsert import species
+
 entrybp = Blueprint("entry", __name__)
 
 def errors(rqst) -> Tuple[str, ...]:
@@ -76,14 +78,14 @@ def zip_file_errors(filepath, upload_dir) -> Tuple[str, ...]:
 def upload_file():
     """Enables uploading the files"""
     if request.method == "GET":
-        return render_template("index.html")
+        return render_template("index.html", species = species())
 
     upload_dir = app.config["UPLOAD_FOLDER"]
     request_errors = errors(request)
     if request_errors:
         for error in request_errors:
             flash(error, "alert-error")
-        return render_template("index.html"), 400
+        return render_template("index.html", species = species()), 400
 
     filename = secure_filename(request.files["qc_text_file"].filename)
     if not os.path.exists(upload_dir):
@@ -96,7 +98,7 @@ def upload_file():
     if zip_errors:
         for error in zip_errors:
             flash(error, "alert-error")
-        return render_template("index.html"), 400
+        return render_template("index.html", species = species()), 400
 
     return redirect(url_for(
         "parse.parse", filename=filename,