gn-transform-databases - Data transformers for GeneNetwork (particularly to RDF)

Age	Commit message (Expand)	Author
2023-07-30	Replace "gn-term" with "gnt" prefix	Munyoki Kilyungi
2023-07-30	Use "string->binomial-name" to id species	Munyoki Kilyungi
2023-07-30	Use correct URL for rdf prefix	Munyoki Kilyungi
2023-07-30	Add dct: prefix to genotype dump	Munyoki Kilyungi
2023-07-30	Update phenotype dump	Munyoki Kilyungi
2023-07-30	Dump probesetfreeze metadata using new metadata	Munyoki Kilyungi
2023-07-30	Dump probeset-metadata using the new syntax	Munyoki Kilyungi
2023-07-30	Dump genotypes with the new syntax	Munyoki Kilyungi
2023-07-30	Use "gn:" and "gn-term:" when dumping phenotypes	Munyoki Kilyungi
2023-07-30	Replace "publication:" with "pubmed:"	Munyoki Kilyungi
2023-07-30	Use "gn:" and "gn-terms" prefixes	Munyoki Kilyungi
2023-07-30	Make 'inputs' and 'outputs' fields lists	Munyoki Kilyungi
2023-07-30	Remove unnecessary prefixes	Munyoki Kilyungi
2023-07-30	Rename 'gn-id' prefix to 'gn'	Munyoki Kilyungi
2023-07-30	Dump phenotypes with documentation.	Munyoki Kilyungi
2023-07-30	Dump probeset metadata with documentation	Munyoki Kilyungi
2023-07-30	Update tissue dump to use gn-term/gn-id	Munyoki Kilyungi
2023-07-30	Replace gn with gn-term and gn-id where suitable	Munyoki Kilyungi
2023-07-30	Replace gn:species with gn-species	Munyoki Kilyungi
2023-07-30	Update dump-species to have lists for inputs and output	Munyoki Kilyungi
2023-07-30	Add "gn:species:" prefix	Munyoki Kilyungi
2023-07-30	Capitalize species identifier	Munyoki Kilyungi
2023-07-30	Dump dataset metadata with documentation	Munyoki Kilyungi
2023-07-30	Dump publication metadata with documentation	Munyoki Kilyungi
2023-07-30	Dump tissue metadata with documentation	Munyoki Kilyungi
2023-07-30	Dump species metadata with documentation	Munyoki Kilyungi
2023-06-19	Chunk probeset dump	Munyoki Kilyungi
2023-06-12	Add a dataset's full name when dumping	Munyoki Kilyungi
2023-06-12	Use PublishFreeze Name as a fallback for InfoPageName	Munyoki Kilyungi
2023-06-12	Annotate a phenotype dataset with 'dataset:	Munyoki Kilyungi
2023-06-12	Replace "Unknown" in Publication fields with an empty string	Munyoki Kilyungi
2023-06-12	Annotate publications without a pmid with "unpublished"	Munyoki Kilyungi
2023-06-12	Use "publication:" as an identifier for publications	Munyoki Kilyungi
2023-06-12	Remove check for confidentiality/publicity during dataset dump	Munyoki Kilyungi
2023-06-12	Add geoPlatfrom to dataset dump	Munyoki Kilyungi
2023-06-12	Add missing Species join when dumping datasets	Munyoki Kilyungi
2023-06-12	Use the correct title for the a dataset	Munyoki Kilyungi
2023-06-12	Rename AboutProcessing alias to AboutDataProcessing	Munyoki Kilyungi
2023-06-12	Replace citations to source from Datasets instead of InfoFiles	Munyoki Kilyungi
2023-06-12	Rename sql-alias of GN notes during dataset dump	Munyoki Kilyungi
2023-06-12	Add rdf defs for datasetOfSpecies	Munyoki Kilyungi
2023-06-12	Add publicationTitle to dataset dump	Munyoki Kilyungi
2023-06-12	Make geoSeries a link during dataset dump	Munyoki Kilyungi
2023-06-12	Minor identation fix	Munyoki Kilyungi
2023-06-12	Add organization to dataset dump	Munyoki Kilyungi
2023-06-12	Use NCBI taxonomy browser instead of uniprot	Munyoki Kilyungi
2023-06-12	Cast longtext fields to fix broket utf-8 characters	Munyoki Kilyungi
2023-06-12	Remove dead comments	Munyoki Kilyungi
2023-06-12	Remove "^[Nn]one$" from some fields from the InfoFiles table	Munyoki Kilyungi
2023-06-12	Default to InfoFiles with the Dataset being a fallback for citations	Munyoki Kilyungi