| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2023-08-19 | Add short name of an inbredSet as an altName | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-08-17 | Rename gnt:species -> gnt:belongsToSpecies | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-08-15 | Rename gnt:molecularTrait -> gnt:hasTissue | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-08-15 | Remove explicity cast when dumping strains | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-08-12 | Add comment on Strain table | Pjotr Prins | |
| 2023-08-07 | Replace gnt:name/shortName with skos:label/altLabel | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-08-07 | Dump molecular traits | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-08-07 | Add extra metadata to gnc: and gnt: items | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-08-04 | Annotate terms related to species | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-08-04 | Add gnt:shortName to species dump | Munyoki Kilyungi | |
| 2023-08-02 | Correct the associations between subject and object | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-07-31 | Remove duplicate entries for alias/symbol/name when dumping strains | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-07-31 | Fix terms in inbredSet dump | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-07-31 | Update how MappingMethod, InbredSet and AvgMethod are modelled | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-07-31 | Update how strains are modelled | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-07-31 | Update how species are modelled | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-07-31 | Use the correct name for Monkey (Macaca nemestrina) | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-07-31 | Use remap-identifiers | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-07-31 | Merge branch 'master' into self-document-while-dumping | BonfaceKilz | |
| 2023-07-31 | Replace "gn-term" with "gnt" prefix | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-07-31 | Use "string->binomial-name" to id species | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-07-31 | Use correct URL for rdf prefix | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-07-30 | Replace "gn-term" with "gnt" prefix | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-07-30 | Use "string->binomial-name" to id species | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-07-30 | Use correct URL for rdf prefix | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-07-30 | Rename 'gn-id' prefix to 'gn' | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-07-30 | Replace gn with gn-term and gn-id where suitable | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-07-30 | Replace gn:species with gn-species | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-07-30 | Update dump-species to have lists for inputs and output | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-07-30 | Add "gn:species:" prefix | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-07-30 | Capitalize species identifier | Munyoki Kilyungi | |
| Replace gn:species_mus_musculus with gn:species:Mus_musculus. | |||
| 2023-07-30 | Dump species metadata with documentation | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-07-30 | Remap identifiers | Pjotr Prins | |
| 2023-07-30 | Remap identifiers | Pjotr Prins | |
| 2023-07-21 | Rename 'gn-id' prefix to 'gn' | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-07-21 | Replace gn with gn-term and gn-id where suitable | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-07-21 | Replace gn:species with gn-species | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-07-21 | Update dump-species to have lists for inputs and output | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-07-21 | Add "gn:species:" prefix | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-07-21 | Capitalize species identifier | Munyoki Kilyungi | |
| Replace gn:species_mus_musculus with gn:species:Mus_musculus. | |||
| 2023-07-21 | Dump species metadata with documentation | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-06-12 | Use NCBI taxonomy browser instead of uniprot | Munyoki Kilyungi | |
| NCBI presents data in a user friendly way from the taxid. To get the same data from uniprot, you need a unique identify which requires an extra query to retrieve. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-05-26 | Replace dump.scm with separete dumps for several tables | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
 |
index : gn-transform-databases | |
| Data transformers for GeneNetwork (particularly to RDF) |
| aboutsummaryrefslogtreecommitdiff |