Age | Commit message (Expand) | Author |
---|---|---|
2023-06-12 | Make geoSeries a link during dataset dump•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
2023-06-12 | Minor identation fix•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
2023-06-12 | Add organization to dataset dump•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
2023-06-12 | Use NCBI taxonomy browser instead of uniprot•••NCBI presents data in a user friendly way from the taxid. To get the same data from uniprot, you need a unique identify which requires an extra query to retrieve. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
2023-06-12 | Cast longtext fields to fix broket utf-8 characters•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
2023-06-12 | Remove dead comments•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
2023-06-12 | Remove "^[Nn]one$" from some fields from the InfoFiles table•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
2023-06-12 | Default to InfoFiles with the Dataset being a fallback for citations•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
2023-06-12 | Make ((g/ph)enotype/probeset)Dataset subset of Dataset•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
2023-05-30 | Add probeset as an extra prefix•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
2023-05-30 | Delete unused prefixes•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
2023-05-30 | Replace species with inbredSet metadata when dumping info-files•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
2023-05-30 | Only dump public data•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
2023-05-26 | Fix broken utf-8 chars when dumping an investigator's names•••* examples/dump-dataset-metadata.scm (dump-investigators) <foaf:name, foaf:givenName>: Binary convert fields first to latin1 then utf8. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
2023-05-26 | Remove an investigator's email/phone from dump for privacy reasons•••* examples/dump-dataset-metadata.scm (dump-investigators) <foaf:phone, foad:mbox>: Delete. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
2023-05-26 | Update a dataset's subject identifier to be a gn url•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
2023-05-26 | Replace dump.scm with separete dumps for several tables•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |