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Data transformers for GeneNetwork (particularly to RDF)
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2023-05-26
Return an empty string if args passed to ontology is empty
Munyoki Kilyungi
2023-05-26
Replace chars not allowed in RDF
Munyoki Kilyungi
2023-05-26
Dump molecular traits, also referred to as Probesets
Munyoki Kilyungi
2023-05-26
Update how inbred-set in dumped
Munyoki Kilyungi
2023-05-26
Fix how a symbol is displayed in the final RDF
Munyoki Kilyungi
2023-05-26
Update how Species are dumped
Munyoki Kilyungi
2023-04-05
Delete "operation" from fields
Munyoki Kilyungi
2023-04-05
Simplify pattern matching when checking for a node
Munyoki Kilyungi
2023-04-05
Wrap the password in quotes
Munyoki Kilyungi
2023-04-05
Update GeneRIF prefix
Munyoki Kilyungi
2023-04-05
Add species data to generif entries
Munyoki Kilyungi
2023-04-05
Dump genewiki symbol
Munyoki Kilyungi
2023-04-05
Annotate gn:geneWikiEntry as a class and add a comment
Munyoki Kilyungi
2023-04-05
Dump species, symbols and indicate generif type when a geneid = 0
Munyoki Kilyungi
2023-04-05
Separate NCBI and GN wikientries in dump
Munyoki Kilyungi
2023-04-05
Add dublin-core and uniprot prefixes
Munyoki Kilyungi
2023-04-05
Avoid prefixing 'pubmed: to an empty string
Munyoki Kilyungi
2023-04-05
Delete generif file dump
Munyoki Kilyungi
2023-04-05
Refactor dump-generif-basic/dump-generif to dump-gn-genewiki-entries
Munyoki Kilyungi
2023-04-05
Use match syntax to print object correctly during dump
Munyoki Kilyungi
2023-04-05
Redefine how genewiki is dumped
Munyoki Kilyungi
2023-04-05
Split substring int a list of substrings delimited by substring
Munyoki Kilyungi
2023-04-05
Add new special form for representing blank nodes
Munyoki Kilyungi
2023-04-05
Allow running raw queries in field form
Munyoki Kilyungi
2023-04-05
Make dumping metadata about a given table optional defaulting to #f
Munyoki Kilyungi
2023-04-05
Add "xsd:" and "owl:" prefixes
Munyoki Kilyungi
2023-04-05
Annotate fields with a custom scheme such as "^^xsd:datetime"
Munyoki Kilyungi
2023-04-05
Dump GeneRIF wikidata
Munyoki Kilyungi
2023-04-05
Add a method to transform epoch time to a human readable format
Munyoki Kilyungi
2023-04-05
Add pubmed, taxon and generif prefixes
Munyoki Kilyungi
2023-04-05
Create a method to define ontologies as symbols
Munyoki Kilyungi
2023-04-05
Add ability to have operations such as GROUP_CONCAT in SELECT clause
Munyoki Kilyungi
2023-03-24
Instructions for running in a container and added dependencies
Pjotr Prins
2023-03-08
Dump GeneWiki metadata
Munyoki Kilyungi
2023-03-06
Dump relevant metadata about phenotypes
Munyoki Kilyungi
2023-03-06
Delete phenotype and publish_xref metadata
Munyoki Kilyungi
2023-03-06
Add mapping method and species info to inbredsets.
Munyoki Kilyungi
2023-02-15
Read metadata from a json file
Munyoki Kilyungi
2023-02-15
Remove dump-case-attributes
Munyoki Kilyungi
2022-12-06
Use InfoPageName as a dataset's name.
Munyoki Kilyungi
2022-11-25
Provide a sample conn.scm.
Arun Isaac
2022-11-25
Document generif-data-file connection parameter.
Arun Isaac
2022-11-25
Split up README into subsections.
Arun Isaac
2022-11-04
Add comment with URI to GeneRIF data.
Arun Isaac
2022-11-04
Unite importing GeneRIF with dumping SQL data.
Arun Isaac
2022-11-04
Revert "Put isql commands on a single line."
Arun Isaac
2022-10-31
Put isql commands on a single line.
Arun Isaac
2022-10-30
Import GeneRIF data into RDF.
Arun Isaac
2022-10-30
Move triple utilities to new module.
Arun Isaac
2022-10-30
Move string-blank? to (dump utils).
Arun Isaac
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