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author | Arun Isaac | 2022-11-25 18:43:04 +0000 |
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committer | Arun Isaac | 2022-11-25 18:43:04 +0000 |
commit | 65d48f9f0a5ff3f52cc7f01e52fa220e7f562457 (patch) | |
tree | 266bcdc7e25ca5af319265670f09502a3881acc1 | |
parent | de098fee5b1b89d1cecfbeca75a3976b6fcb1b9b (diff) | |
download | gn-transform-databases-65d48f9f0a5ff3f52cc7f01e52fa220e7f562457.tar.gz |
Provide a sample conn.scm.
* README.md (Using)[Set up connection parameters]: Provide a sample
conn.scm.
-rw-r--r-- | README.md | 16 |
1 files changed, 16 insertions, 0 deletions
@@ -46,6 +46,22 @@ Download the GeneRIF data file from https://ftp.ncbi.nih.gov/gene/GeneRIF/generifs_basic.gz and specify its path in the `generif-data-file` parameter. +Here's a sample *conn.scm*. +``` scheme +((generif-data-file . "/home/gn/generifs_basic.gz") + (sql-username . "webqtlout") + (sql-password . "my-secret-password") + (sql-database . "db_webqtl") + (sql-host . "localhost") + (sql-port . 3306) + (virtuoso-port . 9081) + (virtuoso-username . "dba") + (virtuoso-password . "my-secret-virtuoso-password") + (sparql-scheme . http) + (sparql-host . "localhost") + (sparql-port . 9082)) +``` + ## Dump the database Then, to dump the database to \~/data/dump, run |