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gn-transform-databases
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Data transformers for GeneNetwork (particularly to RDF)
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2022-05-05
Prefix SQL connection parameters with sql-.
Arun Isaac
2022-05-05
README: Replace org mode with markdown.
Arun Isaac
2022-05-05
README: Link to genenetwork.org CI.
Arun Isaac
2022-05-05
README: Add CI badges.
Arun Isaac
2022-05-04
Read SPARQL connection settings from file.
Arun Isaac
2022-05-04
Import guile-hashing in manifest.
Arun Isaac
2022-05-04
Add script to load RDF into virtuoso.
Arun Isaac
2022-05-04
Special case investigator ID for "Yohan BosseĢ".
Arun Isaac
2022-04-15
pre-inst-env: Rename prepend-path-env! to prepend-path-environment!.
Arun Isaac
2022-03-10
Ignore 0th command-line argument.
Arun Isaac
2022-03-10
Accept connection parameters and dump directory as arguments.
Arun Isaac
2022-03-10
Rename the delete verb of map-alist to remove.
Arun Isaac
2022-03-10
Work around broken upstream guile-sparql package.
Arun Isaac
2022-03-10
Remove guix: prefix from guile-libyaml.
Arun Isaac
2022-03-10
Use run64 to run tests.
Arun Isaac
2022-03-10
Add Makefile.
Arun Isaac
2022-03-10
Allow tabs in Makefiles.
Arun Isaac
2022-03-09
Rename guix.scm to manifest.scm.
Arun Isaac
2022-01-04
Eval macro helper functions at macro expansion time.
Arun Isaac
2021-12-27
BUGS: Add "Dump table and field annotations to RDF" bug.
Arun Isaac
2021-12-24
Make visualize-schema executable.
Arun Isaac
2021-12-24
README: Execute dump.scm directly without invoking guile.
Arun Isaac
2021-12-24
Add pre-inst-env.
Arun Isaac
2021-12-24
Do not add to load path in script.
Arun Isaac
2021-12-24
README: Add Using section.
Arun Isaac
2021-12-24
README: Add Contributing section.
Arun Isaac
2021-12-24
BUGS: Add table size estimates bug.
Arun Isaac
2021-12-24
BUGS: Add bug tracker.
Arun Isaac
2021-12-24
Visualize RDF schema.
Arun Isaac
2021-12-24
Wrap SQL visualization code into a function.
Arun Isaac
2021-12-24
Import functions from (ccwl graphviz).
Arun Isaac
2021-12-24
Color code dumped tables and columns.
Arun Isaac
2021-12-24
Fetch entire table schema in single SPARQL query.
Arun Isaac
2021-12-24
Add TODO note to prefer JSON query results to CSV.
Arun Isaac
2021-12-24
Document define-dump.
Arun Isaac
2021-12-24
Introduce syntax-let abstraction.
Arun Isaac
2021-12-23
Automatically create domain triples for predicates.
Arun Isaac
2021-12-23
Dump metadata about the dump itself.
Arun Isaac
2021-12-23
Disambiguate user and User tables in RDF identifier.
Arun Isaac
2021-12-23
Abstract column id generation to separate function.
Arun Isaac
2021-12-23
Do not register dumped tables and columns to %dumped.
Arun Isaac
2021-12-23
Add dumped? field to <column> type.
Arun Isaac
2021-12-23
Specify range of gn:inbredSetOfSpecies.
Arun Isaac
2021-12-23
Use foaf:Person instead of gn:investigator.
Arun Isaac
2021-12-23
Add Literal range triples.
Arun Isaac
2021-12-23
Remove duplicate predicates for gn:phenotype.
Arun Isaac
2021-12-23
Rename gn:authors predicate to gn:author.
Arun Isaac
2021-12-23
Add runtime type checking for triple.
Arun Isaac
2021-12-20
Move schema visualization to separate script.
Arun Isaac
2021-12-20
Add guile-sparql to Guix manifest.
Arun Isaac
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