diff options
Diffstat (limited to 'examples')
| -rwxr-xr-x | examples/generif.scm | 30 |
1 files changed, 0 insertions, 30 deletions
diff --git a/examples/generif.scm b/examples/generif.scm index 6619d9e..27fa388 100755 --- a/examples/generif.scm +++ b/examples/generif.scm @@ -16,34 +16,6 @@ -(define-transformer genewiki-symbols - (tables (GeneRIF_BASIC) - "GROUP BY BINARY symbol") - (triples - (string->identifier - "symbol" - (regexp-substitute/global #f "[^A-Za-z0-9:]" - (field GeneRIF_BASIC symbol) - 'pre "_" 'post) - #:proc (lambda (x) x)) - (set rdfs:label - (field GeneRIF_BASIC symbol)))) - -;; Some symbols exist in the RIF table that don't exist in the GeneRIF -;; table. -(define-transformer generif-symbols - (tables (GeneRIF) - "WHERE symbol NOT IN (SELECT symbol from GeneRIF_BASIC) GROUP BY BINARY symbol") - (triples - (string->identifier - "symbol" - (regexp-substitute/global #f "[^A-Za-z0-9:]" - (field GeneRIF symbol) - 'pre "_" 'post) - #:proc (lambda (x) x)) - (set rdfs:label - (field GeneRIF symbol)))) - (define-transformer gn-genewiki-entries (tables (GeneRIF (left-join Species "ON Species.SpeciesId = GeneRIF.SpeciesId") @@ -228,8 +200,6 @@ GROUP BY GeneRIF.Id, GeneRIF.versionId, GeneRIF.symbol") ("owl:" "<http://www.w3.org/2002/07/owl#>"))) (inputs (list - genewiki-symbols - generif-symbols gn-genewiki-entries ncbi-genewiki-entries)) (outputs |