diff options
Diffstat (limited to 'examples')
| -rwxr-xr-x | examples/dataset-metadata.scm | 8 | ||||
| -rwxr-xr-x | examples/generif.scm | 10 | ||||
| -rwxr-xr-x | examples/genotype.scm | 10 | ||||
| -rwxr-xr-x | examples/phenotype.scm | 8 | ||||
| -rwxr-xr-x | examples/probeset-data.scm | 8 | ||||
| -rwxr-xr-x | examples/probeset.scm | 8 | ||||
| -rwxr-xr-x | examples/publication.scm | 8 | ||||
| -rwxr-xr-x | examples/species-metadata.scm | 8 | ||||
| -rwxr-xr-x | examples/tissue.scm | 8 |
9 files changed, 38 insertions, 38 deletions
diff --git a/examples/dataset-metadata.scm b/examples/dataset-metadata.scm index 5680a2b..783b2b7 100755 --- a/examples/dataset-metadata.scm +++ b/examples/dataset-metadata.scm @@ -5,10 +5,10 @@ (srfi srfi-26) (ice-9 match) (ice-9 regex) - (dump strings) - (dump sql) - (dump triples) - (dump special-forms)) + (transform strings) + (transform sql) + (transform triples) + (transform special-forms)) diff --git a/examples/generif.scm b/examples/generif.scm index 0b3c8e4..76f55ee 100755 --- a/examples/generif.scm +++ b/examples/generif.scm @@ -5,10 +5,10 @@ (srfi srfi-26) (ice-9 match) (ice-9 regex) - (dump strings) - (dump sql) - (dump triples) - (dump special-forms)) + (transform strings) + (transform sql) + (transform triples) + (transform special-forms)) @@ -64,7 +64,7 @@ 'gn:geneWikiEntry)) (set gnt:wikiEntryOfSpecies (string->binomial-name (field Species FullName))) - ;; This only dumps symbols not present in the GeneRIF_BASIC table + ;; This only transforms symbols not present in the GeneRIF_BASIC table (set gnt:symbol (let ([geneid (field GeneRIF_BASIC GeneId)]) (if (eq? geneid 0) (field GeneRIF symbol) diff --git a/examples/genotype.scm b/examples/genotype.scm index 63b85a7..6fe60c9 100755 --- a/examples/genotype.scm +++ b/examples/genotype.scm @@ -7,10 +7,10 @@ (srfi srfi-26) (ice-9 match) (ice-9 regex) - (dump strings) - (dump sql) - (dump triples) - (dump special-forms)) + (transform strings) + (transform sql) + (transform triples) + (transform special-forms)) @@ -86,7 +86,7 @@ '^^xsd:double)) (set gnt:hasSequence (field Geno Sequence)) (set gnt:hasSource (field Geno Source)) - ;; Only dump Source2 if it differs from Source + ;; Only transform Source2 if it differs from Source (set gnt:hasAltSourceName (field ("IF((Source2 = Source), NULL, Source2)" Source2))) diff --git a/examples/phenotype.scm b/examples/phenotype.scm index 1c68159..31d7972 100755 --- a/examples/phenotype.scm +++ b/examples/phenotype.scm @@ -7,10 +7,10 @@ (srfi srfi-26) (ice-9 match) (ice-9 regex) - (dump strings) - (dump sql) - (dump triples) - (dump special-forms)) + (transform strings) + (transform sql) + (transform triples) + (transform special-forms)) diff --git a/examples/probeset-data.scm b/examples/probeset-data.scm index d46bcda..ebb6a92 100755 --- a/examples/probeset-data.scm +++ b/examples/probeset-data.scm @@ -5,10 +5,10 @@ (srfi srfi-26) (ice-9 match) (ice-9 regex) - (dump strings) - (dump sql) - (dump triples) - (dump special-forms)) + (transform strings) + (transform sql) + (transform triples) + (transform special-forms)) diff --git a/examples/probeset.scm b/examples/probeset.scm index 68ddb59..2dfdbc2 100755 --- a/examples/probeset.scm +++ b/examples/probeset.scm @@ -5,10 +5,10 @@ (srfi srfi-26) (ice-9 match) (ice-9 regex) - (dump strings) - (dump sql) - (dump triples) - (dump special-forms)) + (transform strings) + (transform sql) + (transform triples) + (transform special-forms)) diff --git a/examples/publication.scm b/examples/publication.scm index 313ee96..d9e2aa5 100755 --- a/examples/publication.scm +++ b/examples/publication.scm @@ -5,10 +5,10 @@ (srfi srfi-26) (ice-9 match) (ice-9 regex) - (dump strings) - (dump sql) - (dump triples) - (dump special-forms)) + (transform strings) + (transform sql) + (transform triples) + (transform special-forms)) diff --git a/examples/species-metadata.scm b/examples/species-metadata.scm index f3794b8..b67c0bc 100755 --- a/examples/species-metadata.scm +++ b/examples/species-metadata.scm @@ -5,10 +5,10 @@ (srfi srfi-26) (ice-9 match) (ice-9 regex) - (dump strings) - (dump sql) - (dump triples) - (dump special-forms)) + (transform strings) + (transform sql) + (transform triples) + (transform special-forms)) diff --git a/examples/tissue.scm b/examples/tissue.scm index 8ce96c8..22b715e 100755 --- a/examples/tissue.scm +++ b/examples/tissue.scm @@ -5,10 +5,10 @@ (srfi srfi-26) (ice-9 match) (ice-9 regex) - (dump strings) - (dump sql) - (dump triples) - (dump special-forms)) + (transform strings) + (transform sql) + (transform triples) + (transform special-forms)) |