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authorMunyoki Kilyungi2023-08-21 15:03:20 +0300
committerMunyoki Kilyungi2023-08-21 15:06:06 +0300
commit8e1e4cceab516afab46ccced63ca9edab663ca11 (patch)
treecad625c3ecf0a555d7b56b777cdade535cb30d07 /examples
parent51b3c0548c98e0bc05e11a89cbf6b75d31b9f8d5 (diff)
downloadgn-transform-databases-8e1e4cceab516afab46ccced63ca9edab663ca11.tar.gz
Rename dump -> transform
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
Diffstat (limited to 'examples')
-rwxr-xr-xexamples/dataset-metadata.scm8
-rwxr-xr-xexamples/generif.scm10
-rwxr-xr-xexamples/genotype.scm10
-rwxr-xr-xexamples/phenotype.scm8
-rwxr-xr-xexamples/probeset-data.scm8
-rwxr-xr-xexamples/probeset.scm8
-rwxr-xr-xexamples/publication.scm8
-rwxr-xr-xexamples/species-metadata.scm8
-rwxr-xr-xexamples/tissue.scm8
9 files changed, 38 insertions, 38 deletions
diff --git a/examples/dataset-metadata.scm b/examples/dataset-metadata.scm
index 5680a2b..783b2b7 100755
--- a/examples/dataset-metadata.scm
+++ b/examples/dataset-metadata.scm
@@ -5,10 +5,10 @@
(srfi srfi-26)
(ice-9 match)
(ice-9 regex)
- (dump strings)
- (dump sql)
- (dump triples)
- (dump special-forms))
+ (transform strings)
+ (transform sql)
+ (transform triples)
+ (transform special-forms))
diff --git a/examples/generif.scm b/examples/generif.scm
index 0b3c8e4..76f55ee 100755
--- a/examples/generif.scm
+++ b/examples/generif.scm
@@ -5,10 +5,10 @@
(srfi srfi-26)
(ice-9 match)
(ice-9 regex)
- (dump strings)
- (dump sql)
- (dump triples)
- (dump special-forms))
+ (transform strings)
+ (transform sql)
+ (transform triples)
+ (transform special-forms))
@@ -64,7 +64,7 @@
'gn:geneWikiEntry))
(set gnt:wikiEntryOfSpecies
(string->binomial-name (field Species FullName)))
- ;; This only dumps symbols not present in the GeneRIF_BASIC table
+ ;; This only transforms symbols not present in the GeneRIF_BASIC table
(set gnt:symbol (let ([geneid (field GeneRIF_BASIC GeneId)])
(if (eq? geneid 0)
(field GeneRIF symbol)
diff --git a/examples/genotype.scm b/examples/genotype.scm
index 63b85a7..6fe60c9 100755
--- a/examples/genotype.scm
+++ b/examples/genotype.scm
@@ -7,10 +7,10 @@
(srfi srfi-26)
(ice-9 match)
(ice-9 regex)
- (dump strings)
- (dump sql)
- (dump triples)
- (dump special-forms))
+ (transform strings)
+ (transform sql)
+ (transform triples)
+ (transform special-forms))
@@ -86,7 +86,7 @@
'^^xsd:double))
(set gnt:hasSequence (field Geno Sequence))
(set gnt:hasSource (field Geno Source))
- ;; Only dump Source2 if it differs from Source
+ ;; Only transform Source2 if it differs from Source
(set gnt:hasAltSourceName
(field ("IF((Source2 = Source), NULL, Source2)"
Source2)))
diff --git a/examples/phenotype.scm b/examples/phenotype.scm
index 1c68159..31d7972 100755
--- a/examples/phenotype.scm
+++ b/examples/phenotype.scm
@@ -7,10 +7,10 @@
(srfi srfi-26)
(ice-9 match)
(ice-9 regex)
- (dump strings)
- (dump sql)
- (dump triples)
- (dump special-forms))
+ (transform strings)
+ (transform sql)
+ (transform triples)
+ (transform special-forms))
diff --git a/examples/probeset-data.scm b/examples/probeset-data.scm
index d46bcda..ebb6a92 100755
--- a/examples/probeset-data.scm
+++ b/examples/probeset-data.scm
@@ -5,10 +5,10 @@
(srfi srfi-26)
(ice-9 match)
(ice-9 regex)
- (dump strings)
- (dump sql)
- (dump triples)
- (dump special-forms))
+ (transform strings)
+ (transform sql)
+ (transform triples)
+ (transform special-forms))
diff --git a/examples/probeset.scm b/examples/probeset.scm
index 68ddb59..2dfdbc2 100755
--- a/examples/probeset.scm
+++ b/examples/probeset.scm
@@ -5,10 +5,10 @@
(srfi srfi-26)
(ice-9 match)
(ice-9 regex)
- (dump strings)
- (dump sql)
- (dump triples)
- (dump special-forms))
+ (transform strings)
+ (transform sql)
+ (transform triples)
+ (transform special-forms))
diff --git a/examples/publication.scm b/examples/publication.scm
index 313ee96..d9e2aa5 100755
--- a/examples/publication.scm
+++ b/examples/publication.scm
@@ -5,10 +5,10 @@
(srfi srfi-26)
(ice-9 match)
(ice-9 regex)
- (dump strings)
- (dump sql)
- (dump triples)
- (dump special-forms))
+ (transform strings)
+ (transform sql)
+ (transform triples)
+ (transform special-forms))
diff --git a/examples/species-metadata.scm b/examples/species-metadata.scm
index f3794b8..b67c0bc 100755
--- a/examples/species-metadata.scm
+++ b/examples/species-metadata.scm
@@ -5,10 +5,10 @@
(srfi srfi-26)
(ice-9 match)
(ice-9 regex)
- (dump strings)
- (dump sql)
- (dump triples)
- (dump special-forms))
+ (transform strings)
+ (transform sql)
+ (transform triples)
+ (transform special-forms))
diff --git a/examples/tissue.scm b/examples/tissue.scm
index 8ce96c8..22b715e 100755
--- a/examples/tissue.scm
+++ b/examples/tissue.scm
@@ -5,10 +5,10 @@
(srfi srfi-26)
(ice-9 match)
(ice-9 regex)
- (dump strings)
- (dump sql)
- (dump triples)
- (dump special-forms))
+ (transform strings)
+ (transform sql)
+ (transform triples)
+ (transform special-forms))