diff options
Diffstat (limited to 'examples')
| -rwxr-xr-x | examples/classification.scm | 6 |
1 files changed, 6 insertions, 0 deletions
diff --git a/examples/classification.scm b/examples/classification.scm index b3c6acf..571f482 100755 --- a/examples/classification.scm +++ b/examples/classification.scm @@ -25,6 +25,7 @@ (gnc:resource_classification_scheme xkos:levels gnc:set) (gnc:resource_classification_scheme xkos:levels gnc:species) (gnc:dataset_type a xkos:ClassificationLevel) + (gnc:dataset_type skos:inScheme gnc:resource_classification_scheme) (gnc:dataset_type skos:prefLabel "Dataset Type") (gnc:dataset_type skos:definition "Classification level describing the biological or experimental nature of a dataset. A dataset can either be a probeSet, a genotype or a phenotype.") (gnc:dataset_type xkos:depth "1") @@ -33,19 +34,23 @@ (gnc:dataset_type skos:member gnc:genotype) (gnc:dataset_type skos:member gnc:phenotype) (gnc:probeset a skos:Concept) + (gnc:probeset skos:inScheme gnc:dataset_type) (gnc:probeset skos:prefLabel "Transcriptomic Datasets") (gnc:probeset skos:altLabel "ProbeSet") (gnc:probeset skos:definition "A category representing microarray or sequencing probe sets that measure gene expression or other molecular traits.") (gnc:probeset skos:note "Individual probe sets are too numerous to list explicitly in this ontology but are available through the GeneNetwork API.") (gnc:genotype a skos:Concept) + (gnc:genotype skos:inScheme gnc:dataset_type) (gnc:genotype skos:prefLabel "Genotype Datasets") (gnc:genotype skos:altLabel "Genotype") (gnc:genotype skos:definition "A category representing genetic marker or variant datasets used for genetic mapping.") (gnc:phenotype a skos:Concept) + (gnc:phenotype skos:inScheme gnc:dataset_type) (gnc:phenotype skos:prefLabel "Phenotype Datasets") (gnc:phenotype skos:altLabel "Phenotype") (gnc:phenotype skos:definition "A category representing measured traits or phenotypes for genetic analysis.") (gnc:species a xkos:ClassificationLevel) + (gnc:species skos:inScheme gnc:resource_classification_scheme) (gnc:species xkos:previousLevel gnc:set) (gnc:species skos:prefLabel "Species") (gnc:species skos:definition "A classification level that that associates a given resource to a species in GeneNetwork.") @@ -58,6 +63,7 @@ (tables (InbredSet)) (schema-triples (gnc:set a xkos:ClassificationLevel) + (gnc:set skos:inScheme gnc:resource_classification_scheme) (gnc:set xkos:nextLevel gnc:species) (gnc:set xkos:previousLevel gnc:dataset_type) (gnc:set skos:prefLabel "InbredSet Group") |