diff options
Diffstat (limited to 'examples/dump-species-metadata.scm')
| -rwxr-xr-x | examples/dump-species-metadata.scm | 10 |
1 files changed, 5 insertions, 5 deletions
diff --git a/examples/dump-species-metadata.scm b/examples/dump-species-metadata.scm index 20b0b05..b0ac6f8 100755 --- a/examples/dump-species-metadata.scm +++ b/examples/dump-species-metadata.scm @@ -28,7 +28,7 @@ ["Bat (Glossophaga soricina)" "Glossophaga soricina"] [str str])) -(define-dump dump-species +(define-transformer dump-species (tables (Species)) (schema-triples (gnc:species a skos:Concept) @@ -97,7 +97,7 @@ At this point it is not very clear how Name, Name2, Symbol and Alias are used. !# -(define-dump dump-strain +(define-transformer dump-strain (tables (Strain (left-join Species "ON Strain.SpeciesId = Species.SpeciesId"))) (schema-triples @@ -129,7 +129,7 @@ At this point it is not very clear how Name, Name2, Symbol and Alias are used. (set gnt:alias (sanitize-rdf-string (field ("IF ((Strain.Alias != Strain.Name), Strain.Alias, '')" Alias)))) (set gnt:symbol (field ("IF ((Strain.Symbol != Strain.Name), Strain.Symbol, '')" Symbol))))) -(define-dump dump-mapping-method +(define-transformer dump-mapping-method (tables (MappingMethod)) (schema-triples (gnc:mappingMethod a skos:Concept) @@ -140,7 +140,7 @@ At this point it is not very clear how Name, Name2, Symbol and Alias are used. (set rdfs:label (field MappingMethod Name)))) -(define-dump dump-inbred-set +(define-transformer dump-inbred-set (tables (InbredSet (left-join Species "ON InbredSet.SpeciesId=Species.Id") (left-join MappingMethod @@ -189,7 +189,7 @@ At this point it is not very clear how Name, Name2, Symbol and Alias are used. molecularTrait)) "||"))))) -(define-dump dump-avg-method +(define-transformer dump-avg-method ;; The Name and Normalization fields seem to be the same. Dump only ;; the Name field. (tables (AvgMethod)) |