diff options
Diffstat (limited to 'examples/datasets.scm')
| -rwxr-xr-x | examples/datasets.scm | 50 |
1 files changed, 2 insertions, 48 deletions
diff --git a/examples/datasets.scm b/examples/datasets.scm index 8abb84f..85a5aee 100755 --- a/examples/datasets.scm +++ b/examples/datasets.scm @@ -21,58 +21,11 @@ ;; Skip monkey datasets "WHERE InfoFiles.InfoPageName NOT LIKE 'INIA_MacFas_%'" "GROUP BY Datasets.DatasetId") - (schema-triples - (gnt:has_case_info a owl:ObjectProperty) - (gnt:has_case_info rdfs:comment "Information about the cases used in this platform") - (gnt:has_case_info rdfs:domain dcat:Dataset) - (gnt:has_case_info rdfs:label "About Case") - (gnt:has_citation a owl:ObjectProperty) - (gnt:has_citation rdfs:comment "Citation for this dataset") - (gnt:has_citation rdfs:domain dcat:Dataset) - (gnt:has_citation rdfs:label "Citation") - (gnt:has_contributors a owl:ObjectProperty) - (gnt:has_contributors rdfs:comment "Contributors of this resource") - (gnt:has_contributors rdfs:comment "Contributors of this resource") - (gnt:has_contributors rdfs:domain dcat:Dataset) - (gnt:has_contributors rdfs:label "Contributors") - (gnt:has_data_processing_info a owl:ObjectProperty) - (gnt:has_data_processing_info rdfs:comment "Information about how this dataset was processed") - (gnt:has_data_processing_info rdfs:domain dcat:Dataset) - (gnt:has_data_processing_info rdfs:label "About Data Processing") - (gnt:has_experiment_design a owl:ObjectProperty) - (gnt:has_experiment_design rdfs:comment "Experiment Design for this resource") - (gnt:has_experiment_design rdfs:domain dcat:Dataset) - (gnt:has_experiment_design rdfs:label "Experiment Design") - (gnt:has_experiment_design_info a owl:ObjectProperty) - (gnt:has_experiment_design_info rdfs:comment "Information about how the experiment was designed") - (gnt:has_experiment_design_info rdfs:domain dcat:Dataset) - (gnt:has_experiment_design_info rdfs:label "Experiment Design") - (gnt:has_experiment_type a owl:ObjectProperty) - (gnt:has_experiment_type rdfs:comment "Information about the experiment type") - (gnt:has_experiment_type rdfs:domain dcat:Dataset) - (gnt:has_experiment_type rdfs:label "Experiment Type Metadata") - (gnt:has_platform_info a owl:ObjectProperty) - (gnt:has_platform_info rdfs:comment "Information about the platform that was used with this dataset") - (gnt:has_platform_info rdfs:domain dcat:Dataset) - (gnt:has_platform_info rdfs:label "About Platform") - (gnt:has_samples a owl:ObjectProperty) - (gnt:has_samples rdfs:domain dcat:Dataset) - (gnt:has_samples rdfs:label "Samples") - (gnt:has_specifics a owl:ObjectProperty) - (gnt:has_specifics rdfs:comment "Has specifics") - (gnt:has_specifics rdfs:domain dcat:Dataset) - (gnt:has_specifics rdfs:label "Specifics") - (gnt:has_summary a owl:ObjectProperty) - (gnt:has_summary rdfs:comment "Summary information about dataset") - (gnt:has_summary rdfs:domain dcat:Dataset) - (gnt:has_summary rdfs:label "Summary") - (gnt:has_tissue_info a owl:ObjectProperty) - (gnt:has_tissue_info rdfs:domain dcat:Dataset) - (gnt:has_tissue_info rdfs:label "Metadata about Tissue for this resource")) (triples (string->identifier "dataset" (field InfoFiles InfoPageName) #:separator "_") (set rdf:type 'dcat:Dataset) (set dct:title (normalize-string-field (field InfoFiles InfoPageName))) (set dct:identifier (format #f "GN~a" (field InfoFiles GN_AccesionId))) + (set gnt:has_genotype_files (string->symbol (format #f "gn-files:GN~a%2F" (field InfoFiles GN_AccesionId)))) (set gnt:has_strain (string->identifier "set" (field InbredSet Name InbredSetName) #:separator "_")) (set gnt:has_experiment_type @@ -153,6 +106,7 @@ ("gn:" "<http://rdf.genenetwork.org/v1/id/>") ("gnc:" "<http://rdf.genenetwork.org/v1/category/>") ("gnt:" "<http://rdf.genenetwork.org/v1/term/>") + ("gn-files:" "<http://files.genenetwork.org/current/>") ("rdf:" "<http://www.w3.org/1999/02/22-rdf-syntax-ns#>") ("rdfs:" "<http://www.w3.org/2000/01/rdf-schema#>") ("owl:" "<http://www.w3.org/2002/07/owl#>") |