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| author | Munyoki Kilyungi | 2023-12-20 01:12:50 +0300 |
|---|---|---|
| committer | Munyoki Kilyungi | 2023-12-22 11:53:23 +0300 |
| commit | 6d2091f91a8b16a17acdf0c9ada085130e82df14 (patch) | |
| tree | 7338cb463e56f48712e3a0a334343b2f24860935 /examples | |
| parent | 793d383b816b6baec63dc7adc9ec74d2dca4a4c9 (diff) | |
| download | gn-transform-databases-6d2091f91a8b16a17acdf0c9ada085130e82df14.tar.gz | |
Update handling of RGD_ID field in genelist metadata transform.
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
Diffstat (limited to 'examples')
| -rwxr-xr-x | examples/genelist.scm | 3 |
1 files changed, 2 insertions, 1 deletions
diff --git a/examples/genelist.scm b/examples/genelist.scm index 7bee085..61d2174 100755 --- a/examples/genelist.scm +++ b/examples/genelist.scm @@ -251,7 +251,8 @@ (set gnt:hasUnigenID (string-trim-both (field GeneList UnigenID))) (set gnt:hasProteinID (string-trim-both (field GeneList ProteinID))) (set gnt:hasAlignID (string-trim-both (field GeneList AlignID))) - (set gnt:hasRgdID (field GeneList RGD_ID)))) + (set gnt:hasRgdID + (field ("IFNULL(RGD_ID, '')" RGD_ID))))) (define-transformer genelist-rn33 (tables (GeneList_rn33)) |