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authorMunyoki Kilyungi2023-06-09 14:58:53 +0300
committerBonfaceKilz2023-06-12 19:06:36 +0300
commitaede661b55eb6b2f4b4b9eeb8972ab2a73a98d83 (patch)
treef11263499d699ece73ba4e2be9b1063a44dd38f1 /examples/dump-publication.scm
parent632b922a580bc08affbc7700a7f892868e3606ac (diff)
downloadgn-transform-databases-aede661b55eb6b2f4b4b9eeb8972ab2a73a98d83.tar.gz
Annotate publications without a pmid with "unpublished"
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
Diffstat (limited to 'examples/dump-publication.scm')
-rwxr-xr-xexamples/dump-publication.scm4
1 files changed, 2 insertions, 2 deletions
diff --git a/examples/dump-publication.scm b/examples/dump-publication.scm
index ef2a36d..ba77256 100755
--- a/examples/dump-publication.scm
+++ b/examples/dump-publication.scm
@@ -39,8 +39,8 @@
pmid)))
(publication-id (field Publication Id)))
(if (string-null? pmid)
- (ontology 'publication:
- publication-id)
+ (string->identifier "unpublished"
+ (number->string publication-id))
(ontology 'publication: pmid)))
(set rdf:type 'gn:publication)
(set gn:pubMedId (ontology 'pubmed: (field ("IFNULL(PubMed_ID, '')" pubmedId))))