diff options
| author | Munyoki Kilyungi | 2026-02-06 09:19:22 +0300 |
|---|---|---|
| committer | Munyoki Kilyungi | 2026-02-06 09:19:22 +0300 |
| commit | ba2f0842b23931856f9349566d89f1a0a0f0fe7d (patch) | |
| tree | c860016910e02e92b792d26e5e1df93e22c177e0 | |
| parent | 522a382af147fac45659afee7a48e10947bddcab (diff) | |
| download | gn-transform-databases-ba2f0842b23931856f9349566d89f1a0a0f0fe7d.tar.gz | |
Link genotype files.
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
| -rwxr-xr-x | examples/datasets.scm | 2 | ||||
| -rwxr-xr-x | examples/ontology.scm | 2 |
2 files changed, 4 insertions, 0 deletions
diff --git a/examples/datasets.scm b/examples/datasets.scm index 55d8c35..e4f35da 100755 --- a/examples/datasets.scm +++ b/examples/datasets.scm @@ -25,6 +25,7 @@ (set rdf:type 'dcat:Dataset) (set dct:title (normalize-string-field (field InfoFiles InfoPageName))) (set dct:identifier (format #f "GN~a" (field InfoFiles GN_AccesionId))) + (set gnt:has_genotype_files (string->symbol (format #f "gn-files:GN~a" (field InfoFiles GN_AccesionId)))) (set gnt:has_strain (string->identifier "set" (field InbredSet Name InbredSetName) #:separator "_")) (set gnt:has_experiment_type @@ -105,6 +106,7 @@ ("gn:" "<http://rdf.genenetwork.org/v1/id/>") ("gnc:" "<http://rdf.genenetwork.org/v1/category/>") ("gnt:" "<http://rdf.genenetwork.org/v1/term/>") + ("gn-files:" "<http://files.genenetwork.org/current/>") ("rdf:" "<http://www.w3.org/1999/02/22-rdf-syntax-ns#>") ("rdfs:" "<http://www.w3.org/2000/01/rdf-schema#>") ("owl:" "<http://www.w3.org/2002/07/owl#>") diff --git a/examples/ontology.scm b/examples/ontology.scm index 4be8bd1..724a75a 100755 --- a/examples/ontology.scm +++ b/examples/ontology.scm @@ -240,6 +240,8 @@ (triple 'gnc:dna_marker 'a 'owl:Class) (triple 'gnc:dna_marker 'a 'skos:Concept) (triple 'gnc:dna_marker 'rdfs:label "A DNA Marker or SNP") + (triple 'gnt:has_genotype_files 'rdfs:label "This resource has these genotype files") + (triple 'gnt:has_genotype_files 'rdfs:domain 'dcat:Dataset) (triple 'gnt:has_genotype_data 'rdf:type 'owl:ObjectProperty) (triple 'gnt:has_genotype_data 'rdfs:label "this resources has genotype data.") (triple 'gnt:has_genotype_data 'rdfs:comment "Associates a resource with its genotype data.") |
