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authorArun Isaac2021-12-16 15:43:54 +0530
committerArun Isaac2021-12-16 15:43:54 +0530
commita182c3d3702f1d65ed36dbb3c747d32ffb1f2791 (patch)
tree53a50b75280b392e4cb02817235d0a1d89ed63ee
parent774a36bcb34cd0885e56d95d5b975158688c29b3 (diff)
downloadgn-transform-databases-a182c3d3702f1d65ed36dbb3c747d32ffb1f2791.tar.gz
Add tests.
* tests.scm: New file.
-rw-r--r--tests.scm82
1 files changed, 82 insertions, 0 deletions
diff --git a/tests.scm b/tests.scm
new file mode 100644
index 0000000..8bb8385
--- /dev/null
+++ b/tests.scm
@@ -0,0 +1,82 @@
+(use-modules (srfi srfi-64)
+ (ice-9 match)
+ (dump sql)
+ (dump string-similarity)
+ (dump utils))
+
+(test-begin "sql")
+
+(test-equal "select query"
+ "SELECT InfoFiles.GN_AccesionId, InfoFiles.InfoFileTitle AS Name, InfoFiles.Title, InfoFiles.Specifics, DatasetStatus.DatasetStatusName FROM InfoFiles LEFT JOIN DatasetStatus USING (DatasetStatusId) WHERE GN_AccesionId IS NOT NULL"
+ (select-query ((InfoFiles GN_AccesionId)
+ (InfoFiles InfoFileTitle Name)
+ (InfoFiles Title)
+ (InfoFiles Specifics)
+ (DatasetStatus DatasetStatusName))
+ (InfoFiles
+ (left-join DatasetStatus "USING (DatasetStatusId)"))
+ "WHERE GN_AccesionId IS NOT NULL"))
+
+(test-end "sql")
+
+(test-begin "string-similarity")
+
+(test-equal "trigrams of a string"
+ (list "coe" "oef" "eff" "ffi" "fic" "ici" "cie" "ien" "ent")
+ ((@@ (dump string-similarity) trigrams) "coefficient"))
+
+(test-equal "Jaccard index"
+ 0.4
+ ((@@ (dump string-similarity) jaccard-index)
+ (list 0 1 2 5 6 8 9)
+ (list 0 2 3 4 5 7 9)))
+
+(test-equal "Jaccard index of equal sets"
+ 1.0
+ ((@@ (dump string-similarity) jaccard-index)
+ (iota 10)
+ (iota 10)))
+
+(test-equal "Jaccard index of disjoint sets"
+ 0.0
+ ((@@ (dump string-similarity) jaccard-index)
+ (iota 10)
+ (iota 10 10)))
+
+(test-end "string-similarity")
+
+(test-begin "utils")
+
+(test-equal "map-alist docstring example"
+ '((spam . 2)
+ (ham . 4)
+ (eggs . 6)
+ (aal . 3)
+ (vel . 0)
+ (vel . 1)
+ (vel . 2)
+ (vel . 3)
+ (fubar . 8))
+ (map-alist '(("foo" . 1)
+ (bar . 2)
+ (foobar . 5)
+ (fubar . 3))
+ (set spam (1+ (key "foo")))
+ (set ham (* 2 (key bar)))
+ (set eggs (* 3 (key bar)))
+ (set aal (+ (key "foo")
+ (key bar)))
+ (multiset vel (iota (* 2 (key bar))))
+ (delete foobar)
+ (else=> (match-lambda
+ ((key . value)
+ (cons key (expt 2 value)))))))
+
+(test-equal "multiple set actions in map-alist should result in multiple keys"
+ '((spam . 4)
+ (spam . 6))
+ (map-alist '((foo . 2))
+ (set spam (* 2 (key foo)))
+ (set spam (* 3 (key foo)))))
+
+(test-end "utils")