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authorMunyoki Kilyungi2023-07-18 16:38:42 +0300
committerMunyoki Kilyungi2023-07-21 14:36:40 +0300
commit9c5473775d2ab19ad8282e913459a525f144b806 (patch)
tree422af79f12ef0be531edd4b4f2ec0fed98cf4d3b
parent0cb537781dd0338c800e5572a7f57f4b8246138c (diff)
downloadgn-transform-databases-9c5473775d2ab19ad8282e913459a525f144b806.tar.gz
Replace gn:species with gn-species
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
-rwxr-xr-xexamples/dump-species-metadata.scm8
1 files changed, 4 insertions, 4 deletions
diff --git a/examples/dump-species-metadata.scm b/examples/dump-species-metadata.scm
index 7c6bfc3..e83893f 100755
--- a/examples/dump-species-metadata.scm
+++ b/examples/dump-species-metadata.scm
@@ -27,7 +27,7 @@
    (gn:family rdfs:range rdfs:Literal))
   (triples
       (string->identifier "" (field Species FullName)
-                          #:ontology "gn:species:"
+                          #:ontology "gn-species:"
                           #:separator ""
                           #:proc string-capitalize-first)
     (set rdf:type 'gn:species)
@@ -55,7 +55,7 @@
     (set rdf:type 'gn:strain)
     (set gn:strainOfSpecies
          (string->identifier "" (field Species FullName)
-                          #:ontology "gn:species:"
+                          #:ontology "gn-species:"
                           #:separator ""
                           #:proc string-capitalize-first))
     ;; Name, and maybe a second name
@@ -93,7 +93,7 @@
     (set gn:inbredSetCode (field InbredSet InbredSetCode))
     (set gn:inbredSetOfSpecies
          (string->identifier "" (field Species FullName BinomialName)
-                             #:ontology "gn:species:"
+                             #:ontology "gn-species:"
                              #:separator ""
                              #:proc string-capitalize-first))
     (set gn:genotype
@@ -121,7 +121,7 @@
   '(("rdf:" "<http://www.w3.org/1999/02/22-rdf-syntax-ns#>")
     ("rdfs:" "<http://www.w3.org/2000/01/rdf-schema#>")
     ("gn:" "<http://genenetwork.org/terms/>")
-    ("gn:species:" "<http://genenetwork.org/terms/species/>")
+    ("gn-species:" "<http://genenetwork.org/terms/species/>")
     ("taxon:" "<http://purl.uniprot.org/taxonomy/>")))
  (inputs
   (list dump-species