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authorMunyoki Kilyungi2023-08-19 16:17:54 +0300
committerMunyoki Kilyungi2023-08-19 16:17:54 +0300
commit5ade56d6a601afac04edf65698fdec2b39bacecf (patch)
tree7aa7cbfd94f4ba0220554d44cce574125f461618
parentdcfe92323fa82c30a199e8d9640668800a93f47b (diff)
downloadgn-transform-databases-5ade56d6a601afac04edf65698fdec2b39bacecf.tar.gz
Point ttl path to /export/data/genenetwork-virtuoso/
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
-rwxr-xr-xexamples/dump-dataset-metadata.scm2
-rwxr-xr-xexamples/dump-genotype.scm2
-rwxr-xr-xexamples/dump-phenotype.scm4
-rwxr-xr-xexamples/dump-species-metadata.scm2
4 files changed, 5 insertions, 5 deletions
diff --git a/examples/dump-dataset-metadata.scm b/examples/dump-dataset-metadata.scm
index 43ac144..2f03dfd 100755
--- a/examples/dump-dataset-metadata.scm
+++ b/examples/dump-dataset-metadata.scm
@@ -245,5 +245,5 @@
dump-investigators))
(outputs
'(#:documentation "./docs/dump-info-pages.md"
- #:rdf "./verified-data/dump-info-pages.ttl")))
+ #:rdf "/export/data/genenetwork-virtuoso/dump-info-pages.ttl")))
diff --git a/examples/dump-genotype.scm b/examples/dump-genotype.scm
index 661c57e..d4849d7 100755
--- a/examples/dump-genotype.scm
+++ b/examples/dump-genotype.scm
@@ -153,4 +153,4 @@
dump-genotypes))
(outputs
'(#:documentation "./docs/dump-genotype.md"
- #:rdf "./verified-data/dump-genotype.ttl")))
+ #:rdf "/export/data/genenetwork-virtuoso/dump-genotype.ttl")))
diff --git a/examples/dump-phenotype.scm b/examples/dump-phenotype.scm
index 203b2f3..bd9c76f 100755
--- a/examples/dump-phenotype.scm
+++ b/examples/dump-phenotype.scm
@@ -43,7 +43,7 @@
'^^xsd:date))
(set gnt:belongsToInbredSet
(string->identifier
- "" (field InbredSet Name)
+ "inbredSet" (field InbredSet Name)
#:separator ""
#:proc string-capitalize-first))))
@@ -145,4 +145,4 @@
dump-phenotypes))
(outputs
'(#:documentation "./docs/dump-phenotype.md"
- #:rdf "./verified-data/dump-phenotype.ttl")))
+ #:rdf "/export/data/genenetwork-virtuoso/dump-phenotype.ttl")))
diff --git a/examples/dump-species-metadata.scm b/examples/dump-species-metadata.scm
index 06daf33..ca51ed2 100755
--- a/examples/dump-species-metadata.scm
+++ b/examples/dump-species-metadata.scm
@@ -223,4 +223,4 @@ At this point it is not very clear how Name, Name2, Symbol and Alias are used.
dump-avg-method))
(outputs
'(#:documentation "./docs/dump-species-metadata.md"
- #:rdf "./verified-data/dump-species-metadata.ttl")))
+ #:rdf "/export/data/genenetwork-virtuoso/dump-species-metadata.ttl")))