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| author | Munyoki Kilyungi | 2024-08-16 11:55:29 +0300 |
|---|---|---|
| committer | Munyoki Kilyungi | 2024-08-16 12:57:09 +0300 |
| commit | 59c576cf30b435a6c90e09d4e50feaf21ba28970 (patch) | |
| tree | daaa48ccadf317a6b1595f52683337849fb1f3de | |
| parent | c81e764186a73b67538a3a4bd227475b546a699e (diff) | |
| download | gn-transform-databases-59c576cf30b435a6c90e09d4e50feaf21ba28970.tar.gz | |
Transform VersionIds in geneWiki transform correctly.
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
| -rwxr-xr-x | examples/generif.scm | 23 |
1 files changed, 8 insertions, 15 deletions
diff --git a/examples/generif.scm b/examples/generif.scm index d214cd1..d4d483e 100755 --- a/examples/generif.scm +++ b/examples/generif.scm @@ -49,7 +49,7 @@ (left-join Species "ON Species.SpeciesId = GeneRIF.SpeciesId") (left-join GeneRIFXRef "ON GeneRIFXRef.GeneRIFId = GeneRIF.Id") (left-join GeneCategory "ON GeneRIFXRef.GeneCategoryId = GeneCategory.Id")) - "WHERE GeneRIF.display > 0 AND GeneRIF.VersionId = 0 AND GeneRIF.comment IS NOT NULL GROUP BY GeneRIF.comment, BINARY GeneRIF.symbol") + "WHERE GeneRIF.display > 0 AND GeneRIF.comment IS NOT NULL GROUP BY GeneRIF.Id, GeneRIF.versionId, GeneRIF.symbol, GeneRIF.SpeciesId, GeneRIF.createtime, GeneRIF.reason") (schema-triples (gnc:GeneWikiEntry a rdfs:Class) (gnc:GNWikiEntry rdfs:subClassOf gnc:GeneWikiEntry) @@ -84,16 +84,9 @@ (initial (sanitize-rdf-string (field GeneRIF initial))) (reason (field GeneRIF reason)) (email (sanitize-rdf-string (field GeneRIF email))) - (categories - (remove (lambda (x) - (or (eq? x #f) - (and (string? x) - (string-null? x)))) - (remove-duplicates - (string-split-substring - (field ("GROUP_CONCAT(DISTINCT GeneCategory.Name SEPARATOR '$$')" - GeneCategory)) - "$$"))))) + (category + (field ("GROUP_CONCAT(DISTINCT GeneCategory.Name SEPARATOR '; ')" + GeneCategory)))) (string->symbol (string-append "[ " @@ -123,11 +116,11 @@ "" (format #f "gnt:reason ~s ; " reason)) (if (string-blank? initial) "" (format #f "gnt:initial ~s ; " initial)) - (if (not (null? categories)) + (if (string-blank? category) + "" (format #f - "~{gnt:belongsToCategory ~s ; ~}" - categories) - "") + "gnt:belongsToCategory ~s ; " + category)) (if (and (string? web-url) (not (string-null? web-url))) (format #f "foaf:homepage ~s ; " web-url) |