diff options
Diffstat (limited to 'run_genecup.sh')
| -rwxr-xr-x | run_genecup.sh | 11 |
1 files changed, 9 insertions, 2 deletions
diff --git a/run_genecup.sh b/run_genecup.sh index 12f2169..ab5d67c 100755 --- a/run_genecup.sh +++ b/run_genecup.sh @@ -1,6 +1,13 @@ #!/bin/sh -cd $(/home/shepherd/guix-profiles/genecup/bin/guix build -L /home/shepherd/guix-past/modules -L /home/shepherd/guix-bioinformatics genecup-with-tensorflow-native) + export EDIRECT_PUBMED_MASTER=/export2/PubMed export PERL_LWP_SSL_CA_FILE=/etc/ssl/certs/ca-certificates.crt export TMPDIR=/export/ratspub/tmp -/home/shepherd/guix-profiles/genecup/bin/guix environment -L /home/shepherd/guix-past/modules -L /home/shepherd/guix-bioinformatics --ad-hoc genecup-with-tensorflow-native -- ./server.py + +# This version for the genecup guix profile which includes guix-bioinformatics, using genecup-channels.scm. +/home/shepherd/guix-profiles/genecup/bin/guix environment --no-grafts genecup-with-tensorflow-native -- /home/shepherd/guix-profiles/genecup/bin/guix build --no-grafts genecup-with-tensorflow-native --cores=4 +cd $(/home/shepherd/guix-profiles/genecup/bin/guix build genecup-with-tensorflow-native) +/home/shepherd/guix-profiles/genecup/bin/guix environment --ad-hoc genecup-with-tensorflow-native -- ./server.py + +#cd $(/home/shepherd/guix-profiles/genecup/bin/guix build -L /home/shepherd/guix-past/modules -L /home/shepherd/guix-bioinformatics genecup-with-tensorflow-native) +#/home/shepherd/guix-profiles/genecup/bin/guix environment -L /home/shepherd/guix-past/modules -L /home/shepherd/guix-bioinformatics --ad-hoc genecup-with-tensorflow-native -- ./server.py |