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-rwxr-xr-xrun_genecup.sh6
1 files changed, 5 insertions, 1 deletions
diff --git a/run_genecup.sh b/run_genecup.sh
index bfe90de..12f2169 100755
--- a/run_genecup.sh
+++ b/run_genecup.sh
@@ -1,2 +1,6 @@
#!/bin/sh
-$(/home/shepherd/guix-profiles/genecup/bin/guix system container -L /home/shepherd/guix-past/modules/ -L /home/shepherd/guix-bioinformatics/ /home/shepherd/guix-bioinformatics/gn/services/genecup-container.scm --network --share=/export2/PubMed=/export2/PubMed --share=/export/ratspub=/export/ratspub)
+cd $(/home/shepherd/guix-profiles/genecup/bin/guix build -L /home/shepherd/guix-past/modules -L /home/shepherd/guix-bioinformatics genecup-with-tensorflow-native)
+export EDIRECT_PUBMED_MASTER=/export2/PubMed
+export PERL_LWP_SSL_CA_FILE=/etc/ssl/certs/ca-certificates.crt
+export TMPDIR=/export/ratspub/tmp
+/home/shepherd/guix-profiles/genecup/bin/guix environment -L /home/shepherd/guix-past/modules -L /home/shepherd/guix-bioinformatics --ad-hoc genecup-with-tensorflow-native -- ./server.py